sample_id
stringlengths 16
16
| population
stringclasses 7
values | region
stringclasses 5
values | is_SSA
bool 2
classes | is_reference_panel
bool 2
classes | sex
stringclasses 2
values | age
int64 18
90
| tissue_type
stringclasses 2
values | tumor_subtype
stringclasses 5
values | is_tumor
bool 2
classes | library_size_millions
float64 23.9
89.8
| detected_genes
int64 10.9k
21.4k
| ACTB
float64 8.85
12.7
| GAPDH
float64 8.87
12.5
| RPLP0
float64 8.71
12.7
| ESR1
float64 0
13.4
| PGR
float64 0
14
| GATA3
float64 0
13.2
| FOXA1
float64 0
13.9
| MKI67
float64 1.11
13.5
| CCNB1
float64 0.18
12.5
| BIRC5
float64 1.7
12.8
| ERBB2
float64 1.46
15.7
| KRT5
float64 0
14.9
| KRT14
float64 0
14.6
| KRT17
float64 0
14.7
| EGFR
float64 0
14.7
| IL20RA
float64 0.46
10.2
| MARCO
float64 0.87
9.71
| HLA_DPA1
float64 0.7
9.84
| HLA_DPB1
float64 0.98
10
| SORD
float64 1.4
8.76
| FAM3A
float64 1.46
8.92
| TAS2R43
float64 1.32
8.63
| NUTM2F
float64 1.16
9.02
| PWP2
float64 0.69
8.65
| PM20D1
float64 0.75
7.94
| BIRC7
float64 0.77
7.88
| HOTAIR
float64 0.45
10.7
| MALAT1
float64 0.59
11.4
| NEAT1
float64 0.63
10.4
| AC009283_1
float64 0.32
10.6
| XIST
float64 6.84
13.5
| MIR21
float64 0.2
8.14
| MIR155
float64 0.26
8.48
| MIR10B
float64 0.11
8.18
| MIR200C
float64 0
6.62
| MIR34A
float64 0.07
6.83
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RNA_SAMPLE_00001
|
SSA_West
|
West
| true
| false
|
Female
| 53
|
Tumor
|
Luminal_B
| true
| 72.98
| 19,202
| 10.666
| 11.14
| 10.617
| 8.512
| 7.883
| 9.087
| 10.084
| 6.726
| 7.713
| 7.665
| 7.547
| 4.315
| 4.645
| 6.276
| 2.955
| 4.575
| 5.747
| 6.953
| 4.038
| 5.798
| 5.319
| 6.269
| 6.065
| 5.544
| 4.739
| 3.708
| 6.8
| 7.387
| 6.1
| 5.592
| 9.884
| 5.632
| 4.967
| 4.04
| 3.762
| 2.214
|
RNA_SAMPLE_00002
|
SSA_West
|
West
| true
| false
|
Female
| 39
|
Normal_breast
|
Normal_like
| false
| 53.4
| 12,760
| 10.554
| 10.466
| 9.516
| 5.833
| 4.399
| 5.585
| 5.088
| 3.519
| 3.954
| 4.034
| 5.982
| 4.503
| 6.133
| 2.886
| 2.847
| 4.935
| 4.445
| 4.217
| 4.854
| 5.633
| 3.099
| 4.485
| 3.737
| 4.862
| 4.189
| 4.805
| 3.566
| 4.106
| 2.318
| 3.14
| 10.166
| 1.913
| 3.99
| 3.419
| 3.276
| 2.814
|
RNA_SAMPLE_00003
|
SSA_West
|
West
| true
| false
|
Female
| 58
|
Tumor
|
Luminal_B
| true
| 54.25
| 15,920
| 10.092
| 9.997
| 10.585
| 9.732
| 8.289
| 9.445
| 8.672
| 8.612
| 7.214
| 8.281
| 7.42
| 5.635
| 4.67
| 4.307
| 2.236
| 4.975
| 4.7
| 4.678
| 5.516
| 5.717
| 5.752
| 6.635
| 5.935
| 4.395
| 4.482
| 4.826
| 7.262
| 5.846
| 5.856
| 7.079
| 10.143
| 3.721
| 3.55
| 6.473
| 1.629
| 2.866
|
RNA_SAMPLE_00004
|
SSA_West
|
West
| true
| false
|
Female
| 60
|
Tumor
|
Luminal_A
| true
| 67.06
| 14,882
| 10.159
| 10.077
| 11.601
| 12.018
| 9.266
| 10.579
| 10.308
| 6.219
| 4.873
| 8.807
| 4.984
| 3.755
| 2.723
| 4.71
| 4.515
| 4.521
| 4.71
| 3.95
| 5.695
| 6.14
| 5.103
| 5.28
| 7.217
| 6.343
| 5.513
| 2.282
| 6.547
| 6.251
| 4.748
| 4.956
| 9.825
| 3.926
| 4.361
| 4.631
| 3.459
| 2.435
|
RNA_SAMPLE_00005
|
SSA_West
|
West
| true
| false
|
Female
| 29
|
Tumor
|
Luminal_A
| true
| 56.42
| 18,229
| 9.818
| 10.814
| 10.895
| 10.417
| 9.499
| 8.935
| 11.52
| 5.644
| 5.383
| 6.52
| 6.061
| 4.761
| 3.182
| 4.917
| 4.039
| 5.112
| 6.614
| 4.849
| 5.18
| 5.976
| 5.704
| 4.894
| 4.117
| 5.483
| 3.646
| 4.327
| 5.579
| 5.282
| 5.732
| 5.927
| 10.556
| 5.339
| 6.676
| 5.113
| 2.462
| 2.867
|
RNA_SAMPLE_00006
|
SSA_West
|
West
| true
| false
|
Female
| 36
|
Tumor
|
HER2_enriched
| true
| 64.55
| 18,204
| 11.371
| 10.191
| 11.34
| 5.954
| 5.073
| 5.796
| 7.211
| 8.957
| 7.288
| 7.295
| 10.568
| 4.122
| 5.093
| 3.649
| 4.486
| 7.402
| 7.618
| 7.55
| 4.205
| 7.006
| 5.583
| 5.57
| 6.426
| 6.133
| 2.618
| 3.749
| 6.134
| 5.17
| 7.497
| 7.939
| 9.992
| 5.739
| 5.491
| 5.579
| 3.894
| 1.588
|
RNA_SAMPLE_00007
|
SSA_West
|
West
| true
| false
|
Female
| 51
|
Tumor
|
Luminal_B
| true
| 63.89
| 17,014
| 10.343
| 10.448
| 11.616
| 7.672
| 8.831
| 10.629
| 7.73
| 7.544
| 8.042
| 8.413
| 7.22
| 2.926
| 4.537
| 3.879
| 4.753
| 6.424
| 4.014
| 6.533
| 5.245
| 6.243
| 5.944
| 7.169
| 5.506
| 5.137
| 3.838
| 3.367
| 6.808
| 4.899
| 6.799
| 5.777
| 8.589
| 6.191
| 2.299
| 4.935
| 3.187
| 1.155
|
RNA_SAMPLE_00008
|
SSA_West
|
West
| true
| false
|
Female
| 47
|
Tumor
|
HER2_enriched
| true
| 63.53
| 16,196
| 10.576
| 11.372
| 10.771
| 5.649
| 5.83
| 7.776
| 6.405
| 7.616
| 8.012
| 7.31
| 11.348
| 6.929
| 4.8
| 3.396
| 5.517
| 5.607
| 6.561
| 5.758
| 7.445
| 4.68
| 4.451
| 6.344
| 3.697
| 5.345
| 5.021
| 2.325
| 6.565
| 5.004
| 4.655
| 5.434
| 9.853
| 4.935
| 6.386
| 5.566
| 2.609
| 1.952
|
RNA_SAMPLE_00009
|
SSA_West
|
West
| true
| false
|
Female
| 50
|
Tumor
|
Basal_like
| true
| 61.79
| 19,470
| 10.349
| 10.407
| 10.17
| 3.184
| 2.927
| 1.554
| 1.401
| 8.056
| 8.711
| 10.02
| 5.842
| 12.045
| 9.636
| 7.725
| 13.626
| 6.515
| 7.079
| 5.512
| 4.937
| 5.639
| 3.707
| 5.26
| 6.42
| 5.904
| 4.529
| 5.869
| 6.875
| 4.596
| 6.351
| 8.425
| 9.752
| 6.991
| 6.319
| 5.173
| 2.136
| 3.272
|
RNA_SAMPLE_00010
|
SSA_West
|
West
| true
| false
|
Female
| 41
|
Tumor
|
Luminal_A
| true
| 70.16
| 15,105
| 10.76
| 9.679
| 10.53
| 8.345
| 10.562
| 9.311
| 11.158
| 5.96
| 5.868
| 4.885
| 7.191
| 4.091
| 4.628
| 4.286
| 3.982
| 6.096
| 6.197
| 6.408
| 3.972
| 5.084
| 4.039
| 5.799
| 6.967
| 6.307
| 3.754
| 4.755
| 6.349
| 6.233
| 4.697
| 7.315
| 9.058
| 4.707
| 5.767
| 4.701
| 3.063
| 3.096
|
RNA_SAMPLE_00011
|
SSA_West
|
West
| true
| false
|
Female
| 60
|
Tumor
|
Luminal_A
| true
| 60.53
| 17,138
| 10.807
| 10.737
| 10.252
| 8.45
| 10.998
| 11.044
| 10.337
| 6.829
| 5.585
| 4.061
| 6.551
| 1.223
| 3.721
| 5.065
| 2.761
| 4.941
| 4.494
| 5.544
| 5.467
| 4.583
| 6.321
| 7.932
| 6.571
| 5.4
| 4.19
| 3.838
| 5.466
| 6.958
| 7.002
| 4.83
| 10.293
| 5.889
| 4.72
| 4.831
| 3.557
| 3.58
|
RNA_SAMPLE_00012
|
SSA_West
|
West
| true
| false
|
Female
| 59
|
Tumor
|
Luminal_A
| true
| 63.43
| 17,305
| 10.894
| 10.561
| 10.141
| 8.443
| 10.596
| 10.108
| 10.456
| 5.671
| 6.603
| 6.579
| 8.079
| 4.522
| 2.612
| 4.105
| 2.604
| 2.887
| 7.226
| 5.125
| 6.539
| 4.905
| 4.773
| 5.008
| 5.727
| 5.659
| 4.748
| 3.853
| 6.04
| 5.157
| 7.469
| 4.686
| 9.342
| 4.661
| 6.911
| 5.613
| 2.317
| 3.658
|
RNA_SAMPLE_00013
|
SSA_West
|
West
| true
| false
|
Female
| 51
|
Tumor
|
Luminal_A
| true
| 64.13
| 17,328
| 11.048
| 10.729
| 10.785
| 8.447
| 11.443
| 9.552
| 8.763
| 5.996
| 6.036
| 5.699
| 7.578
| 4.669
| 1.149
| 2.882
| 2.968
| 5.328
| 7.206
| 4.686
| 7.062
| 5.368
| 6.915
| 5.22
| 5.115
| 5.48
| 5.463
| 4.442
| 6.209
| 6.637
| 5.12
| 6.337
| 9.497
| 6.177
| 5.335
| 5.554
| 1.369
| 3.565
|
RNA_SAMPLE_00014
|
SSA_West
|
West
| true
| false
|
Female
| 62
|
Tumor
|
Basal_like
| true
| 58.58
| 15,275
| 10.747
| 9.941
| 11.006
| 3.434
| 0.209
| 1.97
| 1.835
| 7.01
| 9.917
| 9.626
| 7.826
| 11.095
| 9.445
| 11.117
| 12.042
| 5.835
| 7.152
| 3.945
| 7.775
| 6.22
| 3.21
| 5.844
| 3.712
| 4.95
| 4.911
| 4.178
| 7.757
| 6.564
| 6.463
| 7.598
| 9.73
| 5.48
| 5.585
| 5.446
| 3.928
| 2.467
|
RNA_SAMPLE_00015
|
SSA_West
|
West
| true
| false
|
Female
| 55
|
Tumor
|
Basal_like
| true
| 53.36
| 15,725
| 9.629
| 11.442
| 10.25
| 1.761
| 3.558
| 1.858
| 2.514
| 7.579
| 10.398
| 8.878
| 4.782
| 9.277
| 12.528
| 9.797
| 9.304
| 5.867
| 6.345
| 6.452
| 6.744
| 5.711
| 6.082
| 5.255
| 7.365
| 5.06
| 5.517
| 3.761
| 5.072
| 4.833
| 6.804
| 7.662
| 9.079
| 4.798
| 5.809
| 5.498
| 2.531
| 1.977
|
RNA_SAMPLE_00016
|
SSA_West
|
West
| true
| false
|
Female
| 41
|
Tumor
|
Basal_like
| true
| 62.47
| 17,783
| 10.946
| 10.713
| 10.172
| 2.315
| 2.24
| 0.687
| 1.698
| 9.366
| 8.922
| 7.039
| 5.16
| 9.652
| 11.171
| 13.618
| 10.661
| 5.102
| 6.139
| 6.311
| 7.057
| 6.618
| 6.752
| 5.984
| 5.499
| 6.835
| 3.987
| 4.349
| 6.257
| 4.369
| 7.772
| 7.176
| 8.104
| 6.301
| 5.257
| 6.291
| 3.061
| 1.914
|
RNA_SAMPLE_00017
|
SSA_West
|
West
| true
| false
|
Female
| 54
|
Tumor
|
Basal_like
| true
| 60.21
| 15,921
| 10.089
| 11.134
| 10.896
| 3.498
| 1.606
| 1.037
| 2.639
| 8.166
| 8.69
| 9.525
| 5.674
| 9.914
| 8.817
| 11.624
| 10.058
| 6.918
| 6.786
| 7.391
| 6.064
| 5.187
| 4.503
| 5.012
| 5.807
| 4.765
| 4.584
| 5.621
| 6.055
| 5.186
| 6.087
| 5.077
| 11.067
| 5.568
| 4.917
| 5.052
| 2.054
| 3.809
|
RNA_SAMPLE_00018
|
SSA_West
|
West
| true
| false
|
Female
| 39
|
Normal_breast
|
Normal_like
| false
| 64.7
| 13,207
| 11.022
| 10.377
| 11.134
| 3.666
| 5.725
| 5.092
| 6.159
| 5.061
| 5.022
| 4.894
| 6.562
| 3.29
| 4.537
| 4.254
| 4.567
| 3.785
| 5.507
| 5.137
| 3.611
| 4.809
| 7.065
| 4.647
| 4.669
| 5.406
| 3.313
| 3.926
| 3.551
| 4.402
| 3.938
| 5.952
| 10.037
| 2.822
| 3.824
| 1.887
| 5.353
| 3.209
|
RNA_SAMPLE_00019
|
SSA_West
|
West
| true
| false
|
Female
| 60
|
Tumor
|
Luminal_B
| true
| 69.54
| 18,747
| 10.437
| 10.485
| 10.645
| 9.622
| 8.002
| 8.891
| 8.687
| 6.849
| 6.955
| 8.128
| 7.411
| 3.083
| 4.095
| 3.224
| 5.569
| 5.397
| 6.598
| 3.807
| 5.823
| 6.036
| 5.376
| 5.015
| 5.362
| 6.168
| 3.211
| 4.93
| 6.318
| 5.739
| 5.782
| 6.062
| 11.327
| 5.278
| 4.246
| 4.652
| 2.084
| 1.488
|
RNA_SAMPLE_00020
|
SSA_West
|
West
| true
| false
|
Female
| 49
|
Normal_breast
|
Normal_like
| false
| 40.7
| 15,144
| 11.137
| 10.998
| 9.922
| 4.702
| 4.561
| 2.918
| 5.332
| 5.803
| 4.748
| 3.732
| 4.155
| 3.105
| 4.424
| 3.281
| 4.262
| 4.719
| 5.037
| 3.86
| 4.114
| 3.87
| 5.541
| 4.738
| 1.762
| 5.433
| 4.677
| 3.069
| 4.48
| 3.79
| 1.882
| 5.953
| 9.837
| 3.161
| 2.5
| 2.764
| 4.129
| 3.166
|
RNA_SAMPLE_00021
|
SSA_West
|
West
| true
| false
|
Female
| 48
|
Tumor
|
Luminal_A
| true
| 73.55
| 18,005
| 10.958
| 10.629
| 10.319
| 11.03
| 10.611
| 9.601
| 8.915
| 4.924
| 6.529
| 6.251
| 7.986
| 4.691
| 3.547
| 3.403
| 2.117
| 6.561
| 5.443
| 6.105
| 6.677
| 4.991
| 4.755
| 7.722
| 6.035
| 5.249
| 5.416
| 4.023
| 6.325
| 5.432
| 5.983
| 5.726
| 9.398
| 5.194
| 4.489
| 5.461
| 2.756
| 1.624
|
RNA_SAMPLE_00022
|
SSA_West
|
West
| true
| false
|
Female
| 43
|
Tumor
|
Luminal_B
| true
| 64.97
| 17,765
| 11.827
| 10.709
| 10.792
| 9.479
| 10.02
| 9.957
| 9.319
| 7.967
| 8.843
| 7.925
| 6.011
| 2.199
| 3.648
| 4.144
| 6.966
| 5.38
| 5.547
| 5.096
| 6.119
| 5.752
| 4.925
| 4.59
| 5.138
| 4.741
| 4.092
| 4.427
| 5.499
| 7.454
| 7.159
| 5.77
| 9.229
| 4.976
| 4.893
| 4.95
| 2.682
| 2.16
|
RNA_SAMPLE_00023
|
SSA_West
|
West
| true
| false
|
Female
| 63
|
Tumor
|
Luminal_B
| true
| 60.28
| 16,578
| 10.569
| 10.747
| 10.665
| 9.072
| 8.603
| 9.36
| 8.282
| 6.912
| 7.11
| 7.323
| 6.012
| 1.969
| 4.604
| 5.529
| 4.669
| 5.017
| 3.784
| 5.692
| 3.893
| 5.422
| 4.78
| 3.447
| 6.832
| 4.37
| 3.98
| 4.184
| 5.53
| 6.465
| 5.259
| 6.382
| 10.255
| 3.898
| 5.189
| 4.157
| 2.067
| 3.232
|
RNA_SAMPLE_00024
|
SSA_West
|
West
| true
| false
|
Female
| 48
|
Tumor
|
Basal_like
| true
| 56.73
| 17,447
| 10.891
| 9.986
| 11.07
| 2.285
| 1.413
| 1.864
| 2.769
| 8.68
| 11.115
| 10.491
| 5.917
| 10.226
| 10.278
| 9.779
| 10.65
| 6.988
| 4.951
| 6.943
| 7.234
| 6.015
| 5.383
| 5.978
| 6.669
| 5.448
| 4.321
| 6.219
| 6.807
| 5.493
| 7.373
| 6.902
| 9.476
| 4.617
| 5.691
| 5.452
| 2.005
| 2.929
|
RNA_SAMPLE_00025
|
SSA_West
|
West
| true
| false
|
Female
| 45
|
Normal_breast
|
Normal_like
| false
| 48.79
| 14,925
| 10.746
| 9.619
| 9.944
| 5.013
| 6.826
| 7.868
| 5.505
| 5.046
| 2.557
| 5.904
| 5.45
| 3.84
| 2.005
| 5.876
| 5.325
| 5.094
| 5.792
| 4.851
| 5.621
| 3.823
| 2.954
| 3.857
| 4.274
| 4.421
| 4.203
| 3.568
| 3.971
| 2.815
| 2.729
| 4.041
| 9.566
| 3.004
| 3.436
| 4.312
| 3.984
| 5.451
|
RNA_SAMPLE_00026
|
SSA_West
|
West
| true
| false
|
Female
| 46
|
Tumor
|
HER2_enriched
| true
| 63.25
| 17,827
| 11.227
| 11.06
| 10.299
| 7.083
| 5.626
| 6.302
| 6.133
| 9.644
| 8.893
| 7.114
| 13.892
| 6.002
| 4.339
| 3.635
| 6.139
| 4.981
| 6.801
| 7.069
| 5.35
| 4.835
| 5.077
| 4.61
| 5.707
| 5.835
| 4.955
| 3.55
| 7.34
| 5.512
| 7.339
| 5.013
| 11.254
| 5.083
| 5.979
| 6.043
| 1.984
| 3.668
|
RNA_SAMPLE_00027
|
SSA_West
|
West
| true
| false
|
Female
| 56
|
Tumor
|
Luminal_A
| true
| 55.59
| 16,632
| 10.365
| 11.507
| 10.115
| 10.43
| 9.376
| 11.091
| 12.321
| 5.87
| 6.64
| 6.115
| 7.838
| 3.202
| 4.587
| 3.023
| 6.192
| 3.308
| 5.877
| 5.489
| 5.453
| 5.757
| 5.553
| 5.697
| 5.867
| 7.074
| 1.811
| 5.962
| 8.56
| 4.249
| 6.048
| 7.371
| 10.735
| 6.341
| 5.298
| 3.374
| 4.044
| 3.508
|
RNA_SAMPLE_00028
|
SSA_West
|
West
| true
| false
|
Female
| 54
|
Tumor
|
Luminal_A
| true
| 71.73
| 15,159
| 10.092
| 10.708
| 11.367
| 11.612
| 9.274
| 9.594
| 12.872
| 5.947
| 7.175
| 6.048
| 7.275
| 2.46
| 2.495
| 3.055
| 2.846
| 5.196
| 6.026
| 7.39
| 4.909
| 4.61
| 5.509
| 4.734
| 4.028
| 6.458
| 4.372
| 4.461
| 4.073
| 5.415
| 4.584
| 5.98
| 10.107
| 5.107
| 4.466
| 4.318
| 2.845
| 3.286
|
RNA_SAMPLE_00029
|
SSA_West
|
West
| true
| false
|
Female
| 55
|
Normal_breast
|
Normal_like
| false
| 45.37
| 13,875
| 10.053
| 10.171
| 10.274
| 4.402
| 5.054
| 6.736
| 5.205
| 3.761
| 2.742
| 6.836
| 6.139
| 3.842
| 4.895
| 4.133
| 3.409
| 3.56
| 6.709
| 4.363
| 4.418
| 5.034
| 5.049
| 5.517
| 5.414
| 4.481
| 3.823
| 4.289
| 3.338
| 5.447
| 3.98
| 5.598
| 8.886
| 3.524
| 2.288
| 2.492
| 4.724
| 3.817
|
RNA_SAMPLE_00030
|
SSA_West
|
West
| true
| false
|
Female
| 55
|
Normal_breast
|
Normal_like
| false
| 70.78
| 15,621
| 10.152
| 10.76
| 10.381
| 6.332
| 5.204
| 5.907
| 5.698
| 5.078
| 6.042
| 3.197
| 5.098
| 2.659
| 1.882
| 2.495
| 2.756
| 4.565
| 5.137
| 5.342
| 4.391
| 6.426
| 4.666
| 3.248
| 4.69
| 5.042
| 0.854
| 4.887
| 3.901
| 2.848
| 3.04
| 4.762
| 10.707
| 2.481
| 1.916
| 3.105
| 4.252
| 4.452
|
RNA_SAMPLE_00031
|
SSA_West
|
West
| true
| false
|
Female
| 74
|
Tumor
|
Luminal_A
| true
| 55.49
| 16,853
| 10.71
| 11.183
| 11.365
| 11.601
| 11.302
| 11.813
| 11.013
| 5.911
| 8.034
| 5.124
| 9.164
| 2.33
| 4.565
| 5.233
| 4.051
| 3.45
| 4.552
| 5.857
| 6.136
| 5.339
| 5.567
| 4.178
| 7.097
| 5.16
| 5.01
| 5.563
| 4.845
| 6.128
| 6.278
| 5.742
| 10.742
| 4.466
| 5.044
| 4.703
| 4.86
| 2.47
|
RNA_SAMPLE_00032
|
SSA_West
|
West
| true
| false
|
Female
| 46
|
Tumor
|
Basal_like
| true
| 65.96
| 19,155
| 10.241
| 10.748
| 10.207
| 0
| 1.215
| 1.43
| 1.489
| 8.7
| 9.006
| 7.803
| 6.152
| 11.956
| 12.097
| 10.188
| 11.573
| 5.619
| 5.957
| 6.699
| 5.965
| 4.362
| 6.25
| 4.754
| 5.032
| 6.452
| 4.783
| 4.459
| 5.031
| 5.337
| 6.897
| 7.13
| 10.202
| 5.121
| 5.095
| 5.673
| 1.999
| 3.073
|
RNA_SAMPLE_00033
|
SSA_West
|
West
| true
| false
|
Female
| 44
|
Tumor
|
Luminal_A
| true
| 48.89
| 15,736
| 10.789
| 10.992
| 10.871
| 8.885
| 8.129
| 9.992
| 8.101
| 7.444
| 5.419
| 8.734
| 5.838
| 4.056
| 2.616
| 3.298
| 3.721
| 6.36
| 6.52
| 6.227
| 6.538
| 4.945
| 6.084
| 5.193
| 6.388
| 5.604
| 4.858
| 4.562
| 6.76
| 5.192
| 4.428
| 6.989
| 11.076
| 4.907
| 5.649
| 3.697
| 2.503
| 3.066
|
RNA_SAMPLE_00034
|
SSA_West
|
West
| true
| false
|
Female
| 41
|
Normal_breast
|
Normal_like
| false
| 36.12
| 13,164
| 10.579
| 10.197
| 10.327
| 5.094
| 4.216
| 5.282
| 5.486
| 4.417
| 4.499
| 4.796
| 5.82
| 3.387
| 1.188
| 2.067
| 4.618
| 4.114
| 4.712
| 6.725
| 5.432
| 3.067
| 6.3
| 5.135
| 5.332
| 5.274
| 4.622
| 3.728
| 2.518
| 4.324
| 2.618
| 5.817
| 9.71
| 2.959
| 2.459
| 3.271
| 4.363
| 3.457
|
RNA_SAMPLE_00035
|
SSA_West
|
West
| true
| false
|
Female
| 57
|
Tumor
|
Luminal_A
| true
| 63.62
| 17,081
| 10.652
| 10.324
| 11.857
| 11.183
| 10.728
| 11.126
| 10.3
| 6.151
| 3.857
| 5.281
| 8.965
| 4.892
| 3.743
| 1.607
| 4.262
| 5.222
| 6.198
| 4.388
| 5.01
| 6.297
| 7.235
| 4.907
| 4.6
| 6.421
| 3.166
| 3.231
| 6.266
| 8.086
| 5.151
| 5.63
| 10.089
| 4.622
| 3.587
| 5.642
| 3.149
| 3.293
|
RNA_SAMPLE_00036
|
SSA_West
|
West
| true
| false
|
Female
| 62
|
Tumor
|
Luminal_A
| true
| 58.87
| 18,815
| 10.448
| 10.161
| 11.532
| 7.801
| 9.846
| 9.924
| 9.885
| 4.949
| 5.315
| 7.458
| 8.185
| 2.999
| 2.383
| 1.358
| 4.629
| 6.5
| 2.689
| 3.076
| 5.637
| 5.74
| 5.07
| 5.47
| 5.277
| 5.524
| 3.489
| 4.289
| 5.326
| 5.242
| 4.133
| 5.824
| 10.642
| 4.74
| 4.717
| 6.005
| 3.82
| 4.388
|
RNA_SAMPLE_00037
|
SSA_West
|
West
| true
| false
|
Female
| 49
|
Tumor
|
Basal_like
| true
| 78.06
| 17,071
| 10.121
| 10.439
| 10.987
| 3.44
| 0.951
| 2.255
| 1.207
| 8.853
| 8.838
| 9.381
| 7.832
| 11.07
| 9.984
| 9.786
| 10.271
| 5.428
| 6.44
| 3.889
| 6.089
| 5.381
| 4.455
| 5.156
| 6.508
| 6.573
| 3.82
| 4.771
| 5.001
| 6.204
| 6.731
| 8.027
| 10.954
| 5.667
| 4.771
| 6.587
| 2.728
| 3.359
|
RNA_SAMPLE_00038
|
SSA_West
|
West
| true
| false
|
Female
| 41
|
Tumor
|
HER2_enriched
| true
| 59.02
| 19,390
| 10.395
| 11.158
| 10.657
| 6.569
| 7.62
| 3.995
| 5.935
| 7.606
| 8.946
| 9.191
| 11.33
| 4.374
| 5.245
| 3.472
| 5.4
| 5.182
| 6.734
| 4.682
| 5.433
| 4.824
| 5.232
| 6.739
| 6.261
| 5.068
| 3.868
| 5.097
| 5.336
| 6.522
| 5.894
| 6.328
| 10.647
| 4.965
| 6.279
| 7.26
| 3.483
| 2.933
|
RNA_SAMPLE_00039
|
SSA_West
|
West
| true
| false
|
Female
| 41
|
Tumor
|
Basal_like
| true
| 69.26
| 15,669
| 11.461
| 10.323
| 11.784
| 1.283
| 2.662
| 0.44
| 1.787
| 7.92
| 7.558
| 10.206
| 4.572
| 9.618
| 9.478
| 11.868
| 11.721
| 7.57
| 5.514
| 7.65
| 5.505
| 4.821
| 4.871
| 4.904
| 5.418
| 4.745
| 4.508
| 1.952
| 6.728
| 5.41
| 5.831
| 5.855
| 10.755
| 5.904
| 5.368
| 4.928
| 3.626
| 4.436
|
RNA_SAMPLE_00040
|
SSA_West
|
West
| true
| false
|
Female
| 57
|
Tumor
|
Luminal_B
| true
| 59.78
| 15,082
| 10.349
| 10.98
| 10.479
| 8.141
| 8.098
| 9.092
| 7.466
| 7.965
| 8.088
| 7.55
| 6.257
| 5.222
| 2.401
| 4.207
| 4.873
| 5.659
| 6.731
| 4.365
| 4.709
| 5.085
| 8.462
| 5.957
| 6.126
| 6.088
| 4.371
| 5.244
| 4.13
| 6.277
| 6.428
| 7.019
| 9.075
| 4.134
| 4.185
| 5.418
| 3.429
| 2.24
|
RNA_SAMPLE_00041
|
SSA_West
|
West
| true
| false
|
Female
| 58
|
Tumor
|
Luminal_A
| true
| 75.31
| 17,343
| 10.762
| 10.596
| 11.165
| 10.389
| 11.89
| 8.786
| 8.454
| 5.76
| 7.053
| 6.072
| 8.071
| 3.028
| 4.798
| 2.503
| 4.92
| 6.869
| 4.935
| 5.99
| 5.768
| 5.965
| 6.656
| 6.376
| 5.963
| 6.097
| 3.158
| 4.263
| 4.898
| 5.982
| 7.117
| 5.993
| 7.996
| 4.163
| 5.465
| 4.569
| 3.627
| 2.034
|
RNA_SAMPLE_00042
|
SSA_West
|
West
| true
| false
|
Female
| 56
|
Tumor
|
Basal_like
| true
| 63.05
| 17,518
| 11.095
| 10.372
| 11.09
| 3.507
| 0
| 2.052
| 0.194
| 8.14
| 8.221
| 8.934
| 6.178
| 11.586
| 10.817
| 11.308
| 9.206
| 7.357
| 3.004
| 7.827
| 7.647
| 6.175
| 7.506
| 3.877
| 6.201
| 5.622
| 4.52
| 3.253
| 6.895
| 6.848
| 5.81
| 6.431
| 8.948
| 5.184
| 6.269
| 6.285
| 3.615
| 3.768
|
RNA_SAMPLE_00043
|
SSA_West
|
West
| true
| false
|
Female
| 43
|
Tumor
|
Luminal_A
| true
| 67.79
| 16,227
| 10.87
| 11.243
| 10.01
| 8.615
| 8.559
| 8.214
| 8.949
| 5.975
| 8.012
| 6.063
| 5.284
| 3.699
| 3.273
| 2.561
| 2.794
| 6.567
| 4.09
| 3.834
| 5.967
| 4.947
| 6.897
| 5.361
| 5.41
| 6.208
| 2.795
| 4.604
| 5.634
| 7.027
| 5.353
| 6.177
| 9.713
| 5.33
| 4.799
| 5.21
| 4.403
| 2.771
|
RNA_SAMPLE_00044
|
SSA_West
|
West
| true
| false
|
Female
| 53
|
Normal_breast
|
Normal_like
| false
| 53.22
| 17,743
| 10.695
| 9.283
| 10.167
| 4.296
| 6.422
| 5.406
| 6.564
| 5.612
| 5.607
| 3.777
| 5.505
| 5.14
| 1.763
| 3.119
| 3.925
| 4.898
| 6.237
| 5.529
| 5.206
| 5.736
| 5.688
| 5.037
| 4.681
| 5.891
| 3.131
| 3.735
| 2.843
| 4.732
| 5.233
| 3.064
| 9.877
| 2.616
| 3.86
| 4.134
| 3.617
| 1.527
|
RNA_SAMPLE_00045
|
SSA_West
|
West
| true
| false
|
Female
| 51
|
Normal_breast
|
Normal_like
| false
| 59.22
| 15,054
| 10.524
| 10.982
| 10.318
| 4.87
| 5.144
| 5.989
| 6.379
| 6.633
| 5.403
| 4.855
| 5.886
| 2.334
| 5.203
| 3.754
| 3.226
| 3.832
| 5.427
| 4.519
| 4.706
| 3.496
| 4.609
| 4.488
| 5.377
| 4.759
| 1.416
| 3.426
| 2.546
| 2.957
| 5.004
| 2.311
| 10.236
| 2.594
| 2.44
| 2.217
| 4.256
| 4.345
|
RNA_SAMPLE_00046
|
SSA_West
|
West
| true
| false
|
Female
| 52
|
Normal_breast
|
Normal_like
| false
| 36.2
| 16,380
| 9.907
| 10.694
| 9.91
| 5.041
| 4.221
| 4.971
| 5.299
| 3.851
| 5.314
| 5.445
| 7.706
| 4.614
| 4.912
| 1.377
| 1.15
| 4.503
| 6.587
| 7.274
| 4.112
| 4.472
| 5.49
| 4.823
| 4.845
| 5.571
| 6.244
| 4.974
| 5.869
| 2.156
| 5.075
| 3.05
| 11.341
| 4.086
| 3.483
| 2.406
| 3.613
| 3.678
|
RNA_SAMPLE_00047
|
SSA_West
|
West
| true
| false
|
Female
| 60
|
Tumor
|
Luminal_A
| true
| 66.1
| 17,484
| 11.41
| 11.505
| 10.277
| 10.475
| 10.463
| 9.905
| 10.942
| 6.991
| 5.925
| 6.358
| 6.451
| 2.627
| 3.398
| 1.944
| 4.069
| 6.904
| 5.55
| 6.446
| 5.655
| 4.58
| 7.306
| 3.32
| 5.509
| 4.808
| 5.724
| 4.494
| 8.555
| 6.036
| 5.239
| 4.29
| 10.885
| 4.332
| 4.664
| 5.982
| 3.843
| 2.512
|
RNA_SAMPLE_00048
|
SSA_West
|
West
| true
| false
|
Female
| 52
|
Tumor
|
Basal_like
| true
| 56.37
| 14,892
| 9.672
| 11.082
| 11.137
| 2.357
| 2.187
| 1.294
| 3.468
| 7.216
| 8.532
| 9.161
| 5.8
| 10.498
| 9.877
| 11.149
| 9.042
| 6.156
| 6.732
| 5.967
| 6.305
| 5.694
| 3.915
| 3.999
| 5.621
| 4.952
| 3.807
| 4.812
| 5.511
| 4.087
| 8.157
| 7.71
| 10.958
| 4.603
| 5.438
| 4.485
| 2.952
| 2.722
|
RNA_SAMPLE_00049
|
SSA_West
|
West
| true
| false
|
Female
| 57
|
Normal_breast
|
Normal_like
| false
| 41.38
| 15,603
| 10.371
| 11.361
| 10.543
| 2.952
| 3.688
| 7.596
| 5.141
| 5.24
| 5.01
| 6.416
| 3.093
| 5.095
| 5.012
| 3.507
| 3.996
| 4.429
| 3.115
| 5.38
| 5.047
| 5.241
| 5.434
| 4.456
| 6.344
| 5.007
| 4.288
| 3.555
| 5.05
| 4.104
| 3.915
| 5.207
| 8.622
| 2.776
| 2.51
| 3.299
| 4.253
| 3.991
|
RNA_SAMPLE_00050
|
SSA_West
|
West
| true
| false
|
Female
| 51
|
Normal_breast
|
Normal_like
| false
| 44.29
| 14,971
| 10.662
| 10.411
| 11.054
| 6.112
| 5.519
| 3.154
| 5.282
| 5.63
| 4.721
| 5.303
| 4.775
| 3.779
| 5.181
| 4.444
| 1.945
| 3.142
| 5.243
| 5.968
| 3.139
| 4.811
| 7.136
| 4.758
| 7.273
| 4.259
| 3.218
| 3.167
| 2.721
| 2.309
| 3.779
| 4.145
| 9.427
| 2.619
| 4.157
| 3.777
| 3.793
| 4.344
|
RNA_SAMPLE_00051
|
SSA_West
|
West
| true
| false
|
Female
| 53
|
Tumor
|
Luminal_A
| true
| 46.91
| 17,323
| 10.669
| 10.513
| 10.716
| 9.871
| 8.686
| 11.68
| 10.951
| 6.112
| 4.739
| 4.044
| 8.805
| 3.292
| 4.416
| 2.362
| 3.131
| 5.244
| 5.741
| 5.59
| 4.578
| 4.661
| 5.427
| 3.921
| 4.759
| 5.361
| 4.658
| 5.653
| 5.524
| 6.036
| 4.133
| 6.335
| 9.273
| 4.753
| 5.381
| 5.414
| 1.837
| 3.642
|
RNA_SAMPLE_00052
|
SSA_West
|
West
| true
| false
|
Female
| 57
|
Tumor
|
Luminal_A
| true
| 59.69
| 18,520
| 11.431
| 11.503
| 9.988
| 10.402
| 8.423
| 11.301
| 11.444
| 7.478
| 6.075
| 7.044
| 6.248
| 3.517
| 3.389
| 1.102
| 2.529
| 7.771
| 5.413
| 5.66
| 5.491
| 5.131
| 5.532
| 5.134
| 3.445
| 6.208
| 5.752
| 3.252
| 5.587
| 7.5
| 5.229
| 6.388
| 13.462
| 5.506
| 5.055
| 5.705
| 3.621
| 2.47
|
RNA_SAMPLE_00053
|
SSA_West
|
West
| true
| false
|
Female
| 34
|
Tumor
|
Basal_like
| true
| 46.11
| 17,712
| 11.072
| 10.551
| 11.523
| 3.445
| 2.775
| 1.721
| 0
| 8.826
| 7.164
| 6.643
| 6.447
| 11.907
| 8.159
| 10.192
| 10.479
| 6.008
| 4.921
| 7.631
| 4.949
| 3.746
| 4.263
| 5.933
| 5.26
| 4.807
| 4.775
| 4.599
| 4.193
| 7.018
| 7.681
| 6.377
| 9.812
| 7.015
| 4.932
| 5.367
| 3.265
| 3.039
|
RNA_SAMPLE_00054
|
SSA_West
|
West
| true
| false
|
Female
| 46
|
Tumor
|
HER2_enriched
| true
| 57.82
| 17,107
| 11.484
| 11.104
| 10.663
| 5.136
| 5.269
| 6.95
| 4.407
| 10.903
| 8.468
| 7.121
| 11.982
| 4.039
| 4.497
| 3.187
| 4.714
| 3.877
| 5.4
| 5.173
| 5.498
| 4.812
| 5.531
| 6.299
| 5.825
| 6.669
| 3.851
| 4.592
| 6.864
| 7.652
| 5.77
| 7.289
| 9.314
| 5.044
| 5.213
| 5.863
| 2.13
| 2.242
|
RNA_SAMPLE_00055
|
SSA_West
|
West
| true
| false
|
Female
| 45
|
Tumor
|
Luminal_A
| true
| 54.84
| 17,058
| 10.232
| 10.832
| 10.521
| 10.658
| 10.063
| 11.752
| 10.121
| 5.282
| 6.287
| 6.521
| 5.891
| 5.321
| 3.128
| 2.726
| 3.718
| 4.594
| 6.466
| 6.265
| 5.631
| 6.032
| 5.05
| 4.148
| 5.207
| 5.049
| 2.467
| 3.348
| 4.77
| 4.946
| 7.333
| 6.512
| 10.772
| 5.408
| 5.866
| 5.022
| 4.213
| 2.015
|
RNA_SAMPLE_00056
|
SSA_West
|
West
| true
| false
|
Female
| 43
|
Tumor
|
Luminal_B
| true
| 59.46
| 15,770
| 11.321
| 10.91
| 11.293
| 7.597
| 8.398
| 7.216
| 9.361
| 7.572
| 8.756
| 8.032
| 5.17
| 2.008
| 4.099
| 4.559
| 1.34
| 5.417
| 4.483
| 4.39
| 4.845
| 5.611
| 4.864
| 3.712
| 5.604
| 5.184
| 3.456
| 4.023
| 5.652
| 6.044
| 5.752
| 6.165
| 9.961
| 5.656
| 6.268
| 4.988
| 2.503
| 1.851
|
RNA_SAMPLE_00057
|
SSA_West
|
West
| true
| false
|
Female
| 47
|
Tumor
|
Basal_like
| true
| 65.17
| 15,917
| 11.874
| 12.09
| 10.593
| 0.335
| 2.654
| 4.099
| 0.688
| 10.898
| 7.151
| 7.546
| 6.109
| 11.72
| 10.42
| 11.039
| 11.825
| 7.52
| 5.678
| 5.437
| 7.354
| 5.909
| 6.03
| 4.905
| 6.074
| 4.515
| 4.523
| 4.401
| 6.619
| 7.281
| 5.48
| 7.177
| 10.017
| 4.867
| 4.443
| 7.011
| 2.944
| 2.716
|
RNA_SAMPLE_00058
|
SSA_West
|
West
| true
| false
|
Female
| 66
|
Tumor
|
Luminal_A
| true
| 50.85
| 18,306
| 11.206
| 11.109
| 10.669
| 10.751
| 9.176
| 10.218
| 9.946
| 6.767
| 4.687
| 8.37
| 8.419
| 2.12
| 4.193
| 1.716
| 3.601
| 3.304
| 5.208
| 5.012
| 6.657
| 7.002
| 7.022
| 6.542
| 5.574
| 5.849
| 4.645
| 3.238
| 7.146
| 6.69
| 6.737
| 3.719
| 10.362
| 5.805
| 4.988
| 4.599
| 1.91
| 1.853
|
RNA_SAMPLE_00059
|
SSA_West
|
West
| true
| false
|
Female
| 40
|
Tumor
|
Luminal_A
| true
| 61.23
| 16,718
| 10.576
| 11.464
| 10.072
| 9.654
| 11.694
| 9.688
| 10.066
| 6.325
| 7.206
| 4.445
| 6.597
| 3.565
| 2.302
| 3.912
| 4.444
| 5.952
| 7.279
| 5.067
| 5.999
| 5.928
| 5.288
| 6.52
| 5.759
| 4.419
| 4.976
| 3.851
| 5.677
| 5.751
| 6.735
| 7.079
| 9.872
| 4.827
| 3.362
| 4.432
| 2.243
| 3.249
|
RNA_SAMPLE_00060
|
SSA_West
|
West
| true
| false
|
Female
| 61
|
Tumor
|
Basal_like
| true
| 59.14
| 15,909
| 10.776
| 10.666
| 9.43
| 3.108
| 3.011
| 1.762
| 2.353
| 8.675
| 7.396
| 11.164
| 6.55
| 11.629
| 10.159
| 11.851
| 8.856
| 6.055
| 7.04
| 5.673
| 7.211
| 5.773
| 5.689
| 4.852
| 5.864
| 7.239
| 4.458
| 4.8
| 7.204
| 5.356
| 6.367
| 6.337
| 8.3
| 6.131
| 4.755
| 6.044
| 2.394
| 4.634
|
RNA_SAMPLE_00061
|
SSA_West
|
West
| true
| false
|
Female
| 31
|
Normal_breast
|
Normal_like
| false
| 47.77
| 17,305
| 10.414
| 10.473
| 11.283
| 4.582
| 5.55
| 6.04
| 5.904
| 5.043
| 4.906
| 5.846
| 5.177
| 4.66
| 3.97
| 4.28
| 4.86
| 4.49
| 5.906
| 4.643
| 3.399
| 4.704
| 4.35
| 5.338
| 4.743
| 5.115
| 4.713
| 5.137
| 4.293
| 5.086
| 3.823
| 2.437
| 9.057
| 2.843
| 3.636
| 2.846
| 4.949
| 5.465
|
RNA_SAMPLE_00062
|
SSA_West
|
West
| true
| false
|
Female
| 46
|
Tumor
|
Basal_like
| true
| 52.89
| 19,549
| 9.883
| 11.624
| 10.683
| 1.767
| 1.992
| 1.2
| 3.502
| 8.308
| 8.435
| 7.621
| 5.069
| 9.66
| 9.579
| 10.289
| 9.162
| 7.895
| 6.147
| 6.674
| 7.162
| 7.322
| 6.319
| 5.277
| 4.535
| 5.804
| 5.256
| 4.428
| 6.565
| 6.713
| 4.63
| 6.646
| 10.586
| 5.463
| 6.399
| 6.426
| 2.597
| 3.353
|
RNA_SAMPLE_00063
|
SSA_West
|
West
| true
| false
|
Male
| 52
|
Tumor
|
Basal_like
| true
| 60.34
| 14,565
| 10.606
| 10.185
| 10.767
| 2.683
| 1.782
| 1.1
| 2.234
| 11.444
| 6.828
| 9.233
| 5.256
| 9.989
| 10.374
| 10.087
| 11.222
| 6.058
| 4.138
| 7.58
| 7.429
| 4.954
| 5.545
| 6.596
| 6.43
| 6.722
| 4.637
| 4.993
| 7.909
| 6.157
| 6.941
| 4.353
| 8.736
| 5.9
| 6.022
| 5.19
| 2.515
| 2.716
|
RNA_SAMPLE_00064
|
SSA_West
|
West
| true
| false
|
Female
| 56
|
Tumor
|
Luminal_B
| true
| 61.53
| 14,223
| 10.933
| 10.716
| 10.824
| 8.876
| 7.617
| 7.902
| 10.523
| 7.357
| 8.808
| 6.918
| 7.285
| 3.471
| 3.655
| 3.592
| 5.733
| 7.427
| 5.738
| 5.087
| 4.171
| 4.242
| 6.804
| 4.178
| 5.104
| 5.64
| 1.959
| 3.174
| 4.662
| 5.334
| 6.259
| 7.028
| 9.469
| 4.631
| 4.904
| 4.356
| 3.334
| 3.359
|
RNA_SAMPLE_00065
|
SSA_West
|
West
| true
| false
|
Female
| 58
|
Tumor
|
Luminal_A
| true
| 38.23
| 17,767
| 10.764
| 10.829
| 11.29
| 8.214
| 8.745
| 9.93
| 7.679
| 6.288
| 7.346
| 6.897
| 6.879
| 3.221
| 2.987
| 2.917
| 3.774
| 3.949
| 6.963
| 4.762
| 6.058
| 5.572
| 4.462
| 6.663
| 6.473
| 4.086
| 4.234
| 4.487
| 3.929
| 3.879
| 5.166
| 4.687
| 9.165
| 3.95
| 4.902
| 4.286
| 3.891
| 3.144
|
RNA_SAMPLE_00066
|
SSA_West
|
West
| true
| false
|
Female
| 59
|
Tumor
|
HER2_enriched
| true
| 66.35
| 14,974
| 10.386
| 10.768
| 10.926
| 5.352
| 5.499
| 5.608
| 5.702
| 10.664
| 8.813
| 8.54
| 10.541
| 3.518
| 4.744
| 6.356
| 4.761
| 5.844
| 5.256
| 4.258
| 6.437
| 5.271
| 5.901
| 5.639
| 4.632
| 5.703
| 3.138
| 4.496
| 6.437
| 8.041
| 5.633
| 5.173
| 9.669
| 5.987
| 3.262
| 6.2
| 2.833
| 2.086
|
RNA_SAMPLE_00067
|
SSA_West
|
West
| true
| false
|
Female
| 46
|
Tumor
|
Basal_like
| true
| 57.06
| 16,110
| 10.087
| 9.731
| 11.065
| 1.441
| 1.609
| 2.845
| 2.056
| 7.441
| 9.673
| 10.484
| 6.303
| 9.462
| 8.733
| 9.418
| 10.624
| 7.726
| 5.541
| 5.651
| 7.321
| 5.109
| 7.043
| 5.367
| 6.551
| 5.845
| 4.936
| 4.141
| 6.388
| 6.919
| 7.298
| 7.026
| 8.586
| 5.706
| 4.975
| 5.063
| 3.366
| 4.358
|
RNA_SAMPLE_00068
|
SSA_West
|
West
| true
| false
|
Female
| 45
|
Tumor
|
Luminal_A
| true
| 58.14
| 19,367
| 10.152
| 11.316
| 10.915
| 10.209
| 11.383
| 9.363
| 11.278
| 6.292
| 5.858
| 5.173
| 8.385
| 4.87
| 2.926
| 4.155
| 3.652
| 5.147
| 6.465
| 4.875
| 3.308
| 5.734
| 5.56
| 4.966
| 4.697
| 4.097
| 3.974
| 3.512
| 6.964
| 6.517
| 5.515
| 6.523
| 9.914
| 4.784
| 4.956
| 6.417
| 3.515
| 2.761
|
RNA_SAMPLE_00069
|
SSA_West
|
West
| true
| false
|
Female
| 59
|
Tumor
|
HER2_enriched
| true
| 67.15
| 18,029
| 10.83
| 10.536
| 10.503
| 4.925
| 6.18
| 5.39
| 5.563
| 9.124
| 10.187
| 8.874
| 11.695
| 4.977
| 6.366
| 5.465
| 5.232
| 6.265
| 4.571
| 6.39
| 5.125
| 5.855
| 4.838
| 6.032
| 5.362
| 4.469
| 4.038
| 6.285
| 4.227
| 6.666
| 5.489
| 7.877
| 10.653
| 5.649
| 6.234
| 5.696
| 3.005
| 2.521
|
RNA_SAMPLE_00070
|
SSA_West
|
West
| true
| false
|
Female
| 48
|
Tumor
|
Luminal_A
| true
| 57.11
| 16,443
| 10.705
| 9.754
| 11.215
| 11.947
| 9.568
| 11.175
| 9.866
| 5.898
| 6.118
| 6.586
| 6.079
| 4.227
| 2.877
| 2.212
| 3.476
| 4.806
| 5.173
| 5.446
| 4.16
| 6.813
| 6.231
| 4.933
| 5.483
| 6.072
| 4.488
| 5.992
| 5.761
| 7.189
| 4.665
| 4.819
| 11.348
| 4.654
| 4.066
| 4.962
| 4.011
| 2.389
|
RNA_SAMPLE_00071
|
SSA_West
|
West
| true
| false
|
Female
| 36
|
Tumor
|
Basal_like
| true
| 59.67
| 14,774
| 10.466
| 11.199
| 10.308
| 0.728
| 1.224
| 1.39
| 2.765
| 9.38
| 9.573
| 9.028
| 5.18
| 9.568
| 11.019
| 12.407
| 9.371
| 5.282
| 5.164
| 7.132
| 6.258
| 6
| 5.043
| 6.056
| 5.241
| 4.11
| 5.131
| 4.267
| 6.19
| 6.781
| 5.056
| 6.931
| 9.523
| 5.375
| 6.411
| 6.014
| 2.859
| 2.919
|
RNA_SAMPLE_00072
|
SSA_West
|
West
| true
| false
|
Female
| 38
|
Tumor
|
Basal_like
| true
| 39.52
| 16,013
| 10.784
| 10.318
| 10.037
| 2.48
| 3.306
| 1.279
| 2.875
| 9.725
| 8.023
| 8.272
| 7.603
| 9.16
| 9.769
| 12.859
| 9.817
| 7.653
| 5.278
| 6.438
| 7.386
| 5.079
| 5.59
| 6.17
| 4.688
| 7.516
| 5.234
| 3.978
| 6.265
| 8.412
| 6.145
| 6.028
| 10.917
| 4.38
| 5.437
| 5.567
| 2.437
| 1.748
|
RNA_SAMPLE_00073
|
SSA_West
|
West
| true
| false
|
Female
| 40
|
Tumor
|
Luminal_B
| true
| 60.55
| 17,825
| 10.36
| 10.11
| 11.328
| 9.528
| 8.638
| 9.921
| 9.242
| 9.789
| 8.664
| 6.61
| 6.641
| 3.267
| 4.371
| 3.636
| 2.647
| 6.089
| 6.5
| 5.397
| 5.709
| 4.629
| 5.03
| 5.067
| 6.003
| 5.73
| 4.003
| 3.968
| 4.032
| 7.606
| 3.915
| 6.422
| 10.03
| 4.787
| 4.993
| 4.47
| 3.522
| 1.949
|
RNA_SAMPLE_00074
|
SSA_West
|
West
| true
| false
|
Female
| 55
|
Tumor
|
Basal_like
| true
| 62.62
| 16,186
| 10.487
| 10.5
| 10.617
| 2.502
| 1.964
| 2.933
| 3.045
| 9.309
| 9.683
| 11.025
| 4.387
| 11.791
| 12.354
| 11.02
| 12.785
| 8.074
| 5.963
| 6.04
| 6.831
| 4.938
| 7.94
| 6.21
| 5.542
| 4.231
| 4.527
| 3.233
| 7.26
| 3.998
| 7.884
| 6.076
| 8.647
| 5.487
| 5.513
| 5.449
| 4.104
| 3.305
|
RNA_SAMPLE_00075
|
SSA_West
|
West
| true
| false
|
Female
| 52
|
Tumor
|
Basal_like
| true
| 66.37
| 16,701
| 10.913
| 10.046
| 10.829
| 1.242
| 3.32
| 2.076
| 2.663
| 9.262
| 10.806
| 7.44
| 5.686
| 9.348
| 8.04
| 9.27
| 11.906
| 6.27
| 6.08
| 7.074
| 6.415
| 6.052
| 5.791
| 5.988
| 5.095
| 6.442
| 3.209
| 4.223
| 7.597
| 6.346
| 6.069
| 8.788
| 11.135
| 5.613
| 4.724
| 3.872
| 3.567
| 4.013
|
RNA_SAMPLE_00076
|
SSA_West
|
West
| true
| false
|
Female
| 58
|
Tumor
|
Luminal_A
| true
| 63.17
| 14,947
| 10.78
| 10.457
| 10.781
| 11.943
| 10.789
| 10.576
| 9.955
| 6.914
| 5.777
| 7.055
| 6.607
| 2.513
| 4.478
| 0.822
| 2.846
| 6.113
| 6.725
| 5.972
| 4.828
| 5.454
| 5.762
| 6.904
| 6.329
| 6.335
| 4.359
| 3.336
| 4.594
| 5.699
| 6.699
| 5.498
| 10.458
| 4.364
| 4.488
| 6.126
| 3.613
| 2.755
|
RNA_SAMPLE_00077
|
SSA_West
|
West
| true
| false
|
Female
| 45
|
Tumor
|
Luminal_B
| true
| 53.36
| 18,138
| 11.138
| 11.02
| 10.611
| 7.905
| 8.985
| 10.408
| 8.091
| 8.047
| 9.636
| 7.696
| 7.173
| 2.38
| 4.748
| 3.111
| 2.134
| 4.546
| 5.708
| 3.92
| 4.114
| 6.003
| 5.435
| 4.677
| 5.211
| 7.064
| 5.454
| 4.203
| 6.816
| 6.121
| 4.226
| 4.047
| 9.273
| 3.739
| 5.217
| 4.56
| 3.34
| 3.353
|
RNA_SAMPLE_00078
|
SSA_West
|
West
| true
| false
|
Female
| 52
|
Tumor
|
Basal_like
| true
| 65.52
| 15,883
| 10.958
| 10.222
| 11.056
| 3.223
| 2.723
| 1.823
| 2.567
| 7.467
| 7.241
| 9.467
| 7.108
| 9.022
| 10.518
| 11.027
| 9.763
| 5.961
| 6.913
| 6.408
| 6.413
| 4.616
| 5.472
| 5.142
| 5.19
| 5.013
| 4.275
| 3.519
| 6.512
| 6.135
| 5.568
| 4.551
| 10.758
| 6.097
| 4.856
| 6.045
| 2.18
| 2.754
|
RNA_SAMPLE_00079
|
SSA_West
|
West
| true
| false
|
Female
| 57
|
Tumor
|
Luminal_A
| true
| 55.76
| 16,666
| 11.023
| 10.499
| 10.53
| 10.743
| 10.062
| 9.408
| 10.241
| 7.493
| 7.556
| 5.175
| 5.525
| 4.699
| 3.155
| 0.86
| 2.624
| 5.061
| 5.187
| 6.265
| 4.571
| 6.342
| 5.757
| 4.342
| 5.212
| 5.945
| 4.336
| 4.641
| 5.413
| 6.555
| 5.602
| 8.546
| 8.944
| 7.158
| 4.239
| 6.017
| 3.662
| 2.272
|
RNA_SAMPLE_00080
|
SSA_West
|
West
| true
| false
|
Female
| 47
|
Tumor
|
Luminal_B
| true
| 64.8
| 16,405
| 10.837
| 10.774
| 10.525
| 8.568
| 9.341
| 8.096
| 8.134
| 8.955
| 8.428
| 6.693
| 6.297
| 1.436
| 5.092
| 4.826
| 2.693
| 6.15
| 7.486
| 3.961
| 4.885
| 4.095
| 6.354
| 5.414
| 5.142
| 5.705
| 3.799
| 3.939
| 6.275
| 5.39
| 5.531
| 5.843
| 10.073
| 5.481
| 5.467
| 3.8
| 4.126
| 3.047
|
RNA_SAMPLE_00081
|
SSA_West
|
West
| true
| false
|
Female
| 55
|
Normal_breast
|
Normal_like
| false
| 47.35
| 13,915
| 11.495
| 11.68
| 11.433
| 5.621
| 5.844
| 6.991
| 5.259
| 5.541
| 5.227
| 6.919
| 6.436
| 3.334
| 5.33
| 3.495
| 2.845
| 4.515
| 4.947
| 4.015
| 4.282
| 3.701
| 4.26
| 5.211
| 5.938
| 5.823
| 4.187
| 2.424
| 3.139
| 3.803
| 4.963
| 3.443
| 9.024
| 4.159
| 2.412
| 2.098
| 4.182
| 3.96
|
RNA_SAMPLE_00082
|
SSA_West
|
West
| true
| false
|
Female
| 43
|
Tumor
|
Luminal_A
| true
| 56
| 17,000
| 10.237
| 10.444
| 10.682
| 7.964
| 10.955
| 8.627
| 9.061
| 7.5
| 7.069
| 6.587
| 5.092
| 2.773
| 3.241
| 3.328
| 4.87
| 7.494
| 6.115
| 4.966
| 6.714
| 4.969
| 3.139
| 4.375
| 3.365
| 5.155
| 4.14
| 2.867
| 5.146
| 4.574
| 5.873
| 5.147
| 10.808
| 5.136
| 6.284
| 4.636
| 4.715
| 3.002
|
RNA_SAMPLE_00083
|
SSA_West
|
West
| true
| false
|
Female
| 46
|
Tumor
|
Basal_like
| true
| 55.77
| 19,890
| 9.786
| 10.424
| 9.867
| 0.162
| 0
| 2.617
| 0.671
| 8.745
| 9.892
| 9.463
| 6.214
| 11.957
| 12.431
| 8.998
| 11.08
| 6.028
| 6.153
| 4.789
| 5.768
| 5.12
| 6.787
| 4.46
| 3.353
| 5.495
| 3.169
| 4.174
| 7.161
| 6.4
| 6.069
| 6.343
| 10.678
| 4.576
| 6.083
| 4.696
| 3.482
| 1.766
|
RNA_SAMPLE_00084
|
SSA_West
|
West
| true
| false
|
Female
| 46
|
Tumor
|
Luminal_B
| true
| 64.34
| 16,877
| 10.748
| 11.179
| 10.289
| 8.975
| 9.303
| 8.701
| 9.717
| 8.33
| 7.42
| 9.261
| 7.862
| 2.989
| 2.977
| 3.737
| 4.537
| 3.287
| 4.699
| 4.923
| 4.062
| 4.58
| 5.624
| 5.06
| 5.131
| 4.259
| 4.108
| 2.946
| 7.459
| 7.743
| 5.527
| 4.878
| 10.684
| 5.474
| 6.5
| 6.713
| 1.379
| 3.927
|
RNA_SAMPLE_00085
|
SSA_West
|
West
| true
| false
|
Female
| 37
|
Tumor
|
Basal_like
| true
| 58.22
| 17,658
| 11.089
| 11.068
| 11.2
| 1.44
| 1.047
| 3.187
| 1.128
| 10.861
| 8.236
| 8.619
| 5.61
| 8.651
| 8.654
| 11.594
| 8.436
| 8.82
| 6.206
| 5.271
| 6.72
| 3.284
| 5.2
| 5.315
| 4.36
| 4.931
| 5.673
| 4.465
| 6.899
| 5.713
| 5.177
| 6.259
| 8.034
| 4.623
| 4.498
| 3.869
| 3.519
| 2.896
|
RNA_SAMPLE_00086
|
SSA_West
|
West
| true
| false
|
Female
| 55
|
Tumor
|
Luminal_B
| true
| 55.04
| 17,805
| 9.878
| 10.028
| 11.259
| 11.281
| 9.684
| 9.472
| 8.418
| 7.441
| 8.227
| 9.373
| 7.727
| 5.15
| 2.901
| 4.74
| 3.194
| 5.64
| 6.116
| 4.969
| 4.483
| 5.826
| 5.379
| 5.623
| 6.091
| 6.677
| 4.897
| 4.779
| 5.5
| 5.653
| 6.455
| 5.637
| 10.36
| 4.348
| 6.543
| 5.155
| 3.102
| 2.614
|
RNA_SAMPLE_00087
|
SSA_West
|
West
| true
| false
|
Female
| 45
|
Tumor
|
Luminal_A
| true
| 75.3
| 15,496
| 10.348
| 11.127
| 10.82
| 9.423
| 9.452
| 9.709
| 10.102
| 8.054
| 7.105
| 7.523
| 6.366
| 4.119
| 1.634
| 3.719
| 3.642
| 7.321
| 7.058
| 5.242
| 4.683
| 4.789
| 5.235
| 6.672
| 5.873
| 5.966
| 5.03
| 3.405
| 5.291
| 6.52
| 5.221
| 4.474
| 9.134
| 5.843
| 4.701
| 5.181
| 2.174
| 3.304
|
RNA_SAMPLE_00088
|
SSA_West
|
West
| true
| false
|
Male
| 50
|
Tumor
|
Basal_like
| true
| 57.84
| 17,535
| 10.461
| 10.952
| 10.436
| 1.92
| 1.728
| 2.026
| 2.279
| 8.505
| 8.88
| 9.186
| 6.308
| 10.409
| 9.436
| 10.604
| 11.304
| 4.967
| 4.979
| 5.638
| 6.108
| 3.523
| 6.017
| 5.336
| 3.384
| 4.498
| 4.029
| 2.705
| 7.47
| 6.687
| 7.178
| 5.471
| 10.329
| 4.971
| 5.346
| 5.782
| 2.944
| 3.647
|
RNA_SAMPLE_00089
|
SSA_West
|
West
| true
| false
|
Female
| 55
|
Tumor
|
Luminal_A
| true
| 61.11
| 16,444
| 11.121
| 11.227
| 10.744
| 11.336
| 9.765
| 9.872
| 10.004
| 6.37
| 6.189
| 5.785
| 5.806
| 3.633
| 4.938
| 4.477
| 3.966
| 6.749
| 5.519
| 4.511
| 5.151
| 5.445
| 5.039
| 6.049
| 6.342
| 3.941
| 4.169
| 1.687
| 5.908
| 5.897
| 7.776
| 7.476
| 10.746
| 4.232
| 4.186
| 4.123
| 4.221
| 2.272
|
RNA_SAMPLE_00090
|
SSA_West
|
West
| true
| false
|
Female
| 55
|
Tumor
|
Luminal_A
| true
| 56.92
| 15,920
| 10.071
| 10.866
| 10.777
| 7.775
| 8.698
| 10.255
| 9.928
| 6.099
| 7.106
| 5.057
| 6.205
| 4.122
| 2.721
| 3.875
| 2.125
| 4.676
| 3.718
| 3.443
| 5.024
| 5.905
| 5.397
| 6.544
| 5.146
| 3.592
| 4.61
| 3.329
| 6.126
| 3.715
| 5.725
| 6.703
| 10.464
| 4.799
| 4.959
| 4.602
| 2.761
| 3.501
|
RNA_SAMPLE_00091
|
SSA_West
|
West
| true
| false
|
Female
| 57
|
Normal_breast
|
Normal_like
| false
| 44
| 14,217
| 9.71
| 10.823
| 10.34
| 4.237
| 6.322
| 5.399
| 4.703
| 5.838
| 4.604
| 3.376
| 5.904
| 2.427
| 7.059
| 2.9
| 1.016
| 6.5
| 4.689
| 5.001
| 5.127
| 3.726
| 3.001
| 6.709
| 3.544
| 6.425
| 4.225
| 3.909
| 3.478
| 6.255
| 3.253
| 3.281
| 10.495
| 2.418
| 2.148
| 2.911
| 4.508
| 5.461
|
RNA_SAMPLE_00092
|
SSA_West
|
West
| true
| false
|
Female
| 49
|
Tumor
|
Luminal_B
| true
| 76.24
| 14,787
| 11.195
| 10.182
| 10.207
| 8.408
| 8.344
| 7.878
| 6.622
| 9.395
| 8.847
| 7.932
| 6.281
| 5.421
| 3.862
| 3.248
| 1.966
| 5.987
| 5.115
| 5.71
| 5.618
| 6.026
| 5.65
| 5.18
| 5.954
| 6.31
| 5.646
| 3.246
| 7.062
| 4.362
| 6.964
| 5.359
| 10.633
| 6.154
| 5.143
| 4.962
| 2.921
| 2.624
|
RNA_SAMPLE_00093
|
SSA_West
|
West
| true
| false
|
Female
| 45
|
Tumor
|
Basal_like
| true
| 69
| 16,870
| 9.612
| 11.142
| 11.116
| 2.043
| 1.212
| 0.84
| 1.215
| 9.199
| 7.156
| 9.424
| 5.873
| 12.045
| 11.341
| 9.632
| 8.471
| 5.479
| 7.681
| 6.594
| 6.897
| 4.934
| 5.936
| 4.132
| 6.342
| 4.46
| 2.523
| 6.336
| 6.635
| 6.607
| 4.63
| 7.123
| 10.709
| 5.341
| 6.212
| 6.436
| 3.421
| 1.267
|
RNA_SAMPLE_00094
|
SSA_West
|
West
| true
| false
|
Female
| 49
|
Tumor
|
Luminal_B
| true
| 50.79
| 19,024
| 10.741
| 10.743
| 10.284
| 8.363
| 10.193
| 10.498
| 9.797
| 8.552
| 8.627
| 7.93
| 6.096
| 2.296
| 5.578
| 3.96
| 4.572
| 5.711
| 5.761
| 5.845
| 6.197
| 4.809
| 6.564
| 4.836
| 5.716
| 4.435
| 4.15
| 3.706
| 6.024
| 6.735
| 6.076
| 7.961
| 10.637
| 4.817
| 4.931
| 5.302
| 3.563
| 2.013
|
RNA_SAMPLE_00095
|
SSA_West
|
West
| true
| false
|
Female
| 31
|
Tumor
|
Luminal_A
| true
| 65.09
| 15,550
| 10.97
| 11.25
| 10.85
| 7.674
| 8.218
| 10.563
| 7.546
| 7.11
| 7.485
| 7.635
| 6.559
| 4.026
| 3.751
| 1.733
| 4.394
| 6.89
| 6.189
| 4.997
| 6.24
| 6.668
| 6.55
| 6.424
| 4.067
| 5.858
| 4.881
| 5.235
| 6.516
| 7.552
| 4.172
| 6.558
| 10.383
| 5.722
| 6.234
| 4.289
| 4.207
| 3.652
|
RNA_SAMPLE_00096
|
SSA_West
|
West
| true
| false
|
Female
| 34
|
Tumor
|
Luminal_B
| true
| 58.5
| 15,909
| 10.798
| 10.843
| 10.871
| 8.373
| 9.609
| 8.594
| 10.217
| 9.71
| 7.187
| 8.06
| 8.272
| 4.331
| 2.377
| 5.038
| 3.273
| 5.7
| 4.506
| 6.295
| 5.079
| 6.31
| 5.307
| 5.067
| 5.871
| 4.533
| 5.918
| 4.467
| 5.434
| 5.601
| 6.018
| 6.996
| 9.284
| 4.705
| 4.96
| 6.234
| 3.799
| 4.272
|
RNA_SAMPLE_00097
|
SSA_West
|
West
| true
| false
|
Female
| 35
|
Tumor
|
Luminal_A
| true
| 60.25
| 18,719
| 11.334
| 11.048
| 11.088
| 9.405
| 11.828
| 9.755
| 10.56
| 7.177
| 5.129
| 6.449
| 7.003
| 3.364
| 3.453
| 5.291
| 2.507
| 4.231
| 4.914
| 6.244
| 6.342
| 6.045
| 6.321
| 5.73
| 5.034
| 4.649
| 3.164
| 4.096
| 6.788
| 6.237
| 6.023
| 4.945
| 12.063
| 4.34
| 5.096
| 5.802
| 3.034
| 2.354
|
RNA_SAMPLE_00098
|
SSA_West
|
West
| true
| false
|
Female
| 39
|
Normal_breast
|
Normal_like
| false
| 56.47
| 13,392
| 11.371
| 10.641
| 10.373
| 4.084
| 4.348
| 5.448
| 7.393
| 5.233
| 5.347
| 5.386
| 7.364
| 2.97
| 5.379
| 3.022
| 2.656
| 4.72
| 4.715
| 5.362
| 2.476
| 5.133
| 4.461
| 4.348
| 3.834
| 4.672
| 3.335
| 3.416
| 2.361
| 4.098
| 3.208
| 2.365
| 9.561
| 2.381
| 3.033
| 2.551
| 2.84
| 3.289
|
RNA_SAMPLE_00099
|
SSA_West
|
West
| true
| false
|
Female
| 54
|
Tumor
|
Luminal_A
| true
| 46.19
| 18,364
| 11.349
| 11.409
| 10.405
| 11.297
| 10.407
| 9.178
| 9.371
| 6.328
| 6.602
| 6.863
| 6.798
| 3.082
| 5.123
| 3.363
| 3.295
| 5.283
| 5.387
| 4.138
| 4.497
| 7.701
| 4.015
| 5.745
| 5.808
| 6.411
| 4.63
| 6.002
| 6.24
| 7.348
| 7.04
| 7.542
| 10.02
| 5.318
| 4.705
| 5.128
| 3.172
| 1.338
|
RNA_SAMPLE_00100
|
SSA_West
|
West
| true
| false
|
Female
| 40
|
Tumor
|
HER2_enriched
| true
| 58.85
| 18,067
| 10.025
| 10.207
| 11.278
| 7.343
| 5.379
| 6.174
| 5.922
| 9.677
| 7.967
| 8.121
| 13.141
| 3.796
| 4.402
| 5.159
| 6.829
| 4.807
| 5.289
| 6.593
| 6.747
| 5.69
| 5.395
| 5.617
| 4.143
| 5.591
| 5.634
| 3.112
| 5.716
| 6.103
| 6.166
| 8.341
| 9.254
| 4.595
| 6.117
| 4.983
| 3.63
| 2.842
|
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