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A T5-large model
Trained from scratch on a mixed dataset of DNA, protein sequences, and English text
import torch
import numpy as np
from transformers import AutoTokenizer, AutoModelForSeq2SeqLM, Seq2SeqTrainer, Seq2SeqTrainingArguments
from datasets import load_dataset
tokenizer = AutoTokenizer.from_pretrained("dnagpt/t5-gene-eng-small")
print(tokenizer.tokenize("ATCGGAAGGTAAGGGAAAGCG"))
from transformers import AutoModelForSeq2SeqLM
model = AutoModelForSeq2SeqLM.from_pretrained("dnagpt/t5-gene-eng-small", from_flax=True)
print(model.config)
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