Dataset Viewer
src
stringlengths 15
120
| tgt
stringlengths 3
40
|
|---|---|
GTCCGCTTACCCAATGGGTCCAGATCACCTGCGATAACACGTTCGCACCCTCGGAGTGCACCGCCCGCCGGAGAGTCTTTTCGCCTTGTCAGTTTGTCC
|
VRLPNGSRSPAITRSHPRSAPPAGESFRLVSLS
|
TTACTGACCGGCTGAATGTCACCCACCCCTAATTACATACAATGTTCATAGCGCTGTTCAGAGGTTGACTCGGTTTTCCTAAAGGCTAACTCA
|
LLTG
|
AGAATAATGCATTCTCGTACTTGTCTCTATGGAAGCACATGC
|
RIMHSRTCLYGSTC
|
CATGTCAGGCGGAACATGCTGATTAGACTGCTTCCTAAACTCTTGAATCTATTCAATGGGTCAGCATCGAGAGCGCCATTGTTACGG
|
HVRRNMLIRLLPKLLNLFNGSASRAPLLR
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GACTGTTACACTCGTAACGTGCCTGCCACGTGCATGTCCTATATTGTCTTAGGTGATCGCAGCGACCAGATATTTACAATTTCC
|
DCYTRNVPATCMSYIVLGDRSDQIFTIS
|
ACGGTGCAAGTCACTAATGCGGCAACACCTGTCCATATTTTCCTTCCTGCTTCTGTCCCCGATTGGACAAGTCTTTCCGGACATCTCAAGCTGAAT
|
TVQVTNAATPVHIFLPASVPDWTSLSGHLKLN
|
GGCTCGCACCCGACAACCTGCGCTCTTACCGAAACAATACTAGTCCTAGCCCCCCGTGCGAGAATAGACGGCTGCTACTCT
|
GSHPTTCALTETILVLAPRARIDGCYS
|
AAAAAACTTCCCAACTCCAAATTGGAAAGGTGTCCTTTGTCCTGCCGACCCAGGGGTCCCCTTCGCCCGCATATTGTCTAAGGCCGCATTAGGACCTGATTAGAGGCT
|
KKLPNSKLERCPLSCRPRGPLRPHIV
|
GGCAGGGATCTTACAACGAGTGGT
|
GRDLTTSG
|
AGGGCCTCTCTGATTCAGAACACCTCCCATTACAATGCGATTGCCAGGCCCCAGCCCTTCGTCATAGTCTGTGGGATCCGGCGTTATATCACTTTATTTCGTGTA
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RASLIQNTSHYNAIARPQPFVIVCGIRRYITLFRV
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AAGGTGTTTATGGGTCCCGGTCACTAGGACATGCGTCTACTCCAAATGATCTTCGACCTACTCGGCCAACAGTCATGCTAAACGGTATACTATAACAACAATCCAGGG
|
KVFMGPGH
|
CATCGTCACTCTCACCTTTTTTGAGGAGGTCTCTGCAAACTATTAAAGACCTAATCA
|
HRHSHLF
|
CGGGCAGGAGATTGCGTTGCGCCATTGTGT
|
RAGDCVAPLC
|
GACAGACCGCGACAGCTACGATCCTGAGACAACCCTTTAGACCTCCTTAAGATCAGT
|
DRPRQLRS
|
TTAAGCGGACGCTCAGCCCAGTGAGGCCCGATCCAGGGGATGCTGCCA
|
LSGRSAQ
|
AACACTCTCCTCCTGTGATCGCAGGGCACAACTAGATCTTACGAAGGTGCGGCACACTCGAAGCCATAAGACCAGCCAACGATGCCTTAAACTGGCGATTCA
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NTLLL
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TATGAGGCTTGAATGAACTGTTACCATTCCTCGCGTGAAGATTACCAGAGGCACGACTTT
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YEA
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TCCACTCTGAAGCGT
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STLKR
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ATCTTGGAAACAGTCTCATCGAACAGATCCCGAGACTACTGATGTGTG
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ILETVSSNRSRDY
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GTCGAACCCATGTGGCGGCTTGGCCTATCTCCGCTCATATCGTCCGAGCGACGG
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VEPMWRLGLSPLISSERR
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ACACCTTCCGAGTAGTGTCAAACACCCTAATTA
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TPSE
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GCTTCGAAGTCGGACGGACCAACCTTCGTCGCTTGAGCATACAAGCTACACATGGGGGAAGCACTATAGTCTAGGATTGGTATAACACAAGGA
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ASKSDGPTFVA
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GATGAGCGTCACAGCTTTGTTGGGAACGCTTCCTCCGCTCCTAAGAACATACCACCCGCTTAACGACTGATTAGT
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DERHSFVGNASSAPKNIPPA
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CATCAGGGTAAGTGTAGA
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HQGKCR
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ATCCCCATTGAAGTCGCACCCCACCAACTGATATGTGCATTCGGTGCGAAGGTAATACCATGTCTGAGCAAAGAGTGGCGTGAAAAGAAT
|
IPIEVAPHQLICAFGAKVIPCLSKEWREKN
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TTGAATCCTCCCAATCCTTTCCAGGCG
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LNPPNPFQA
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TTGGCAGCACTGTGTTACACTTCAGAT
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LAALCYTSD
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CCGGAAGGTGCGTTAAGTGACGTAATTGTTCCCCTTTAAAGGTCTGTTGGT
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PEGALSDVIVPL
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TATGCCATATTCTCGAGCGCATCGTAACATTTTCCGCGTATACCATTTGGTAGAGTCCATGTCGATTTATTGCCGTTTTTACCCGATAACTTTTCCGCGATGTCATTTGTTCGA
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YAIFSSAS
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TCAAACGCCAAGTAACTCAGGGTTTAACAATGGAATTAAAGCTGATGG
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SNAK
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ATATCATGTCGACGTCATATGTTGGACATAGCTCGATTACCTACGTCGAAGCATTCGACCTACGTG
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ISCRRHMLDIARLPTSKHSTYV
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GGCGGGGGGAACCAGTGATGAGCAATCATAGCCCGGGCATATAGT
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GGGNQ
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CCAGCTGTTACGCACGAGACAAACGCCTCACTGGCAGATTTCGGACATAAGGTTGATTTTTAAGCCCTTTATATATTATGTACCAAAAATGGCATCCAGTCTACATTGATTTGG
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PAVTHETNASLADFGHKVDF
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ACAGCCACTTTCTCTGGGCGACTCAGGTACGCGAGTCGGGCGAGTAGTGGTAAGCTTTAGGGTTTGCCCTCCACGTGAACTCAGATGGTGGGTGTCGTC
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TATFSGRLRYASRASSGKL
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CTCTGTGATCGACTACTGCATTATGGCGCTCCGTACGACTTCTTAGGTCAG
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LCDRLLHYGAPYDFLGQ
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GTATTCCTTTGCCTGAGTGACCCACTTGCTTTTAAGTAGCCCCTTTGCTGTTGGTGTGCGAGCAAA
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VFLCLSDPLAFK
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ATACCGTGCGTAGGCCTG
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IPCVGL
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CCGTTTCTGTGCTTATGAGGCGGTGGATGGTGAGAGAAGGCCAACACTAAGAGC
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PFLCL
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TCAATCGGACTTGCGAGACCCCCATATGCAAAGAAGAACTTAGACAGGAACTAATTACCCTGGTTATCA
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SIGLARPPYAKKNLDRN
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AAGGCGTACAATGACCATTTAAAGAGT
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KAYNDHLKS
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TCCGGGCACCGTAGTAAATATTAGAACTTGTTCAGCTAAGGAAGCCCGAGAGGCAGCCATAGGACCGGACACTTTTTATCAAAAATGCAGACCTGA
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SGHRSKY
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ACGACAATTGTACAG
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TTIVQ
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GATCGTTTTGCCGTGGGCAAGTTCGTCACAGCAACATCCCTTTGATGC
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DRFAVGKFVTATSL
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CAGTTACTTGGGACGCCGTTCGAGGGTTCCAAATCTGTGATTATGAAATCCCTCAGCCTGACACGCACACGTCAGCCTCGGTGGCGGGACCATCACTAAATT
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QLLGTPFEGSKSVIMKSLSLTRTRQPRWRDHH
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AGGGAGCAATGTATTACGGCCCAAAACTGATCTCCTTTTTGCCGAAGGTCTTTTAGGCCT
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REQCITAQN
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ACTTCTTTCTAGACAGTGCCCTACAACCATGTCCCCCGTTTCACGCGCACGTACGTGATCAGT
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TSF
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TCGAATACCCAAATTCGCATGAGCATTATCAAGCGGAACTCGTGACATCAAATTCACCTATTACTCACCCCGGTTGGATCAGAGTCGTTGACGTTCGCC
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SNTQIRMSIIKRNS
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GCGGTAAGTCACCACGTCTCTAATCCTTATAACCGC
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AVSHHVSNPYNR
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GATGTGGCGTTTTTGCCCCACCAGAGCTCGGGGAGGTGCAGACGCCGCCGGCAGTGACTGCATAGGTGCGGGTAG
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DVAFLPHQSSGRCRRRRQ
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GAAAACCACGATCCCGGCATGTCCTCG
|
ENHDPGMSS
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TCATATGTGTTTACTAGCGCAGTCCGATCCTAACTA
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SYVFTSAVRS
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GCGGCAAAAGATACTCGATAGGGATGCGAGTAGCGACTGCCGCGGGCCTCACTTAGCACCGCGTACCTATCCAGCTGGCCAGGCTTGCGTTAATTAATAATGACTGAA
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AAKDTR
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GTATACTTTCGCGCCCCCGAGTTGCCAGCTTTCCGTAAGCGTTTGTAGAGGGTATCCCGTTGCCGTAGGATGCGAATCCGCCCCCGCACCGGCATTGCTAGGCGCGTT
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VYFRAPELPAFRKRL
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CTGAACATTACTGCTGGAACGTCGCCCTAGAACCTGCAGTGACTGCGATCAAGCGGATGGCTGCTTGCAAATCTAGTTCCT
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LNITAGTSP
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CGCCTGATCGGTGCCTACTGCGGTAATGCCTGATCGTACTGGTAGCACTAGGTGATAGACTCC
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RLIGAYCGNA
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CGTCGGACTTTCGATCTCGCTTGTCCTATACATTGCAATAGTGTGTTT
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RRTFDLACPIHCNSVF
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TCGACAGGTGTTATATGGGTACCT
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STGVIWVP
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GCGCGTTCACATAAGCTTCGCTCATACCCGGAAAGAATCATGTTCTTGCTCTTAAGATGG
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ARSHKLRSYPERIMFLLLRW
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ATCTTACAGAGGGTTTTGGAACAAGTTAGTTACTTACCCACATGTCATCTTGAGTACTGCTTCACTATTTTGTGTAGTTCATCGCACATCGGCCACTTTGCAAGAAGACGCGGA
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ILQRVLEQVSYLPTCHLEYCFTILCSSSHIGHFARRRG
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AATCTGTTCGTTGAGCGTTAAACCCAACTCCCCGATACCCACCAGTAGCCATGGACCAGTACAGCTGGTTGAACATAACTGACT
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NLFVER
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GGAACGCGTGCCCCATCCCATACGCTAGTCCCTCTTTGCTAATCAGGATCTGCAGTA
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GTRAPSHTLVPLC
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TCACCTGTATGATACCCGAATCCCGCGCTACGTAGT
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SPV
|
AACTTCGCGTATGACCGGCCACACGACGAACTTGAT
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NFAYDRPHDELD
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CAAGCCTGTGGGTGGAATTAGACACTCCTACGCCCCCCTCTCAGTGGGTCC
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QACGWN
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CATCGTTTTAAGTTACATGTATATTATAGTCTACGGTGGACGTGTCAATGAGCGGATTAGACGAGGTGACGACGCAGGCTCAGAGCCAGTTAATATAGTACG
|
HRFKLHVYYSLRWTCQ
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CAGAACAGCAAGAGTGTTACCCCTAATCGCATGAGAGGGGATTAGTACTTTTAAATAGTGCTTTGGACGCGTTAGTTCCGCCAGATGCACGCGACTCGGTTC
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QNSKSVTPNRMRGD
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CCGGTGGATTATTGCTATTTTCTACATAGCCGTTTCCGCTGGATGACAATATTACCG
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PVDYCYFLHSRFRWMTILP
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TTTTTCTCACGCGACAAGTTGGACCTAACT
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FFSRDKLDLT
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GAACTACACGCAGGAGAGTGATTCAGGCATAGGTGCCACTATTCA
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ELHAGE
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CCAAGCACCTGTCTCAATGACGAC
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PSTCLNDD
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CACCTCTACCCGAGTGGTTAACTTAGCGAATCTTTAGTGTGGACGGACACCCAAGTTTGATTCGAGCCATAATTGGGATCTTTGAAGTAGGAGGTGATGGATGTGAGCCCTCTA
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HLYPSG
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GGTCCGATATTGTGACACTTCTTTATTAAATCTCGGCGTGTCTAAGACAGCGTTGTTAATCTCGGGTCCCAG
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GPIL
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TGCTTTAACCTTCCACAACGCGAAGCTTCTCGCGCATAGTCA
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CFNLPQREASRA
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GGTGAACCTGCGAATTGG
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GEPANW
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CCACCGAAAGGAAGATTCGCTTCGGCGGAACTACTCTGGATACTCATGTTCAGACATCATTACCGCCTGGAGTTAACAGCGTCACAGACACGCGACAGT
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PPKGRFASAELLWILMFRHHYRLELTASQTRDS
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CACAAAGTAAGCGCAAACCTGATCCCAGTTAGGGAACGCAAGAAGTACCCCGGCGTGGCCGGCGGCAGTCGATTCGTTCCATCT
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HKVSANLIPVRERKKYPGVAGGSRFVPS
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ACAGCGCCGAGCGATACTAGATTCGCCGTAGTCGTCTTCAAGGAC
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TAPSDTRFAVVVFKD
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CGCCCGTTCTATGGTGCAGAAAGAGCGTCCGACGTAAAACTGGCCAATATG
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RPFYGAERASDVKLANM
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CGGCACGTGCATGCTGCCCCGCCTCCTGTTCGCTCGTCGGGCCCCTCCTTAGCCTCTGTCGATGCGCCGGTAGATACGCCAACGCAACAGGGG
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RHVHAAPPPVRSSGPSLASVDAPVDTPTQQG
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GTTGTGAAACGTCGCGTGACAAGTAATTACTTAGAAGCTAGCTCTGTATTT
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VVKRRVTSNYLEASSVF
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TTAATATCTTCGCGGGATTCGGATTGGATT
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LISSRDSDWI
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GTTCTAGTGAGAAAGATTTCCCCGACCATGAACGCCCATGACGTATGTATACTCAGACCACCGGTCAAACGACTTCATTCT
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VLVRKISPTMNAHDVCILRPPVKRLHS
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AGCGATTATTCCCCATTAATGGTCCATATCCGTATTATTCCGCAGACCTTTCGAGCGTACAGCTTGATATTGAGTTGAAGCAACCTGATCGCGGATATTCGA
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SDYSPLMVHIRIIPQTFRAYSLILS
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GCGTTGGTGGTAGGCCTACTAAAGCATCTAAAACCGTCACTTCTACTAGCCAAGAACCTTTCTGTCTGTCTTCTATGC
|
ALVVGLLKHLKPSLLLAKNLSVCLLC
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GTGGTCGTAAAACTTTCAGATCTAGAATCCTGGCCGTAAACATGTCGTCAATGGTTTATATTTTGCACACGTCTCTCGGGGCCT
|
VVVKLSDLESWP
|
TGCGGCCTCATTTATTTTCAATTGGTCTGGTAAGGATAGTCTTAT
|
CGLIYFQLVW
|
GGGATCCGTCTAGTAGAAGCTGACAGTAATCAGATGCACCGGAATGGCGGGTGGGTACGTGTATGGTATCCTGACGGGAAA
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GIRLVEADSNQMHRNGGWVRVWYPDGK
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AACGAGTGGCCATTTTACTCGATTAAGTTGACACCAACACATAAGTATTGTCGCAAGATATCGTATGACTTG
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NEWPFYSIKLTPTHKYCRKISYDL
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ATCTCACCGACGTGTAAGTTCCCTCAGTTGAATCTATGCCAGGTCCATATGCGTCGTATCTCCCCTGACGTGAGGCTCGCCTTCAGCCCGCCCAAGCCGAATCCTGGGGCGAGAGCC
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ISPTCKFPQLNLCQVHMRRISPDVRLAFSPPKPNPGARA
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CTACCAAGTCTCTTGAGCATCAAATCAAGGTACAGTAGGAAGGTTGCGATTTAGCTACACCCAAGTTCCGGCTAGAGCGCACTACTGCTACCAAGAGTGGCGTCATCTAGCGAT
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LPSLLSIKSRYSRKVAI
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ACTCGACCCGTAGAGGCTGGTTCGCTGAGCATTCCTAGTCCGATTCCGGATTATGGTCGAGATACGTGAGAG
|
TRPVEAGSLSIPSPIPDYGRDT
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TTGCATGTGCGAGCCTGTTTAACCATTCCGACTGGGCAAACGATGTAGAGTGAGGTAGTGGCTACG
|
LHVRACLTIPTGQTM
|
GGCAATGTATGTAGGAGGGCGTCGATGTGCACCAATGGTAAATTACAACCCCCCGAAGCCGGATTAGTTTCCGGATGGAGC
|
GNVCRRASMCTNGKLQPPEAGLVSGWS
|
TGGCAAGTCCTCGTT
|
WQVLV
|
CTTTACGATGGTGCATAGAGGACGTGGCCTGTGTAC
|
LYDGA
|
CAGAGAATCTTCCCTCTCGAGACTTAGACGGTAAAT
|
QRIFPLET
|
CATAAAATCCAGGATTGTAAAGTCGATACATTCTTCACGGAAATCGCGCGTGCAGAATCTATAAGA
|
HKIQDCKVDTFFTEIARAESIR
|
TCGCAACGGGGGTGGGTTTTCCAAGTATAGAGTGCATTAAATGCCCGCGCAGGCGAGCAGTCTTGAGGACGCCCAGAT
|
SQRGWVFQV
|
ATATTTGTACAGTCA
|
IFVQS
|
ACACCTCAATTCAGGTCTCTATCCACTCAC
|
TPQFRSLSTH
|
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Dataset card
This dataset is made randomly from SeongwooChoi's Google Colab.
It is for seq2seq (DNA to amino acid) deep learning test set for Hasung Kim's homework.
Each example consists of a pair of sequences: a DNA string in the src field and the translated amino acid string in the tgt field.
The DNA sequences are generated using random codons with the characters A, C, G, and T. The amino acid sequences are produced by translating each codon according to the standard genetic codon table. Translation stops when a stop codon appears.
This data will be uploaded to the Hugging Face Hub as a public dataset.
All characters are ASCII, and the DNA sequences are multiples of 3 in length. The amino acid sequences use single-letter codes (A–Z except stop).
There are three splits: train, validation, and test.
Dataset Structure
- Fields
src: input DNA sequence (string)tgt: translated amino acid sequence (string)
- Splits
train,validation,test
Specificity
translates will be start from the "Start Codon" and terminate to "Stop Codon"
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