Datasets:

electricsheepafrica
/

african-hepatitis-b-mtct-dataset

patient_id stringlengths 10 10	maternal_age float64 18 45	region stringclasses 3 values	residence stringclasses 2 values	maternal_hbsag_positive bool 2 classes	maternal_hbeag_positive bool 2 classes	maternal_viral_load_log_iu_ml float64 1 10 ⌀	high_viral_load bool 2 classes	antenatal_hbv_screening bool 2 classes	facility_birth bool 2 classes	birth_dose_vaccine_24h bool 2 classes	maternal_antiviral_prophylaxis bool 2 classes	complete_vaccine_series_3doses bool 2 classes	infant_hbv_infected bool 2 classes	infant_chronic_hbv bool 2 classes	projected_cirrhosis_age40 bool 2 classes	projected_hcc bool 2 classes	projected_mortality bool 2 classes
HBV_000001	32.6	West	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000002	34.7	West	Rural	true	true	6.2	false	true	false	false	false	true	false	false	false	false	false
HBV_000003	24.3	West	Rural	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000004	26.5	East	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000005	24.1	East	Urban	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000006	20.7	West	Urban	false	false	null	false	true	false	false	false	true	false	false	false	false	false
HBV_000007	29.8	East	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000008	29.9	East	Urban	true	false	4.1	false	false	false	false	false	true	false	false	false	false	false
HBV_000009	34	East	Urban	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000010	28.6	Southern	Rural	false	false	null	false	true	true	false	false	false	false	false	false	false	false
HBV_000011	34.3	West	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000012	25	East	Urban	false	false	null	false	true	true	false	false	false	false	false	false	false	false
HBV_000013	26.7	East	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000014	27.9	East	Rural	false	false	null	false	true	true	true	false	false	false	false	false	false	false
HBV_000015	28.5	West	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000016	27.4	West	Rural	false	false	null	false	true	false	false	false	true	false	false	false	false	false
HBV_000017	18	East	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000018	32	West	Urban	false	false	null	false	true	true	true	false	true	false	false	false	false	false
HBV_000019	35.5	Southern	Urban	false	false	null	false	false	true	true	false	false	false	false	false	false	false
HBV_000020	20.7	East	Rural	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000021	24.8	Southern	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000022	18	West	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000023	41.7	Southern	Rural	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000024	34.6	West	Rural	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000025	26.5	East	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000026	31.3	East	Rural	false	false	null	false	true	false	false	false	true	false	false	false	false	false
HBV_000027	18	East	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000028	20.2	East	Rural	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000029	23.2	East	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000030	26	Southern	Rural	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000031	32.9	East	Urban	false	false	null	false	true	false	false	false	false	false	false	false	false	false
HBV_000032	36	West	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000033	26.5	East	Rural	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000034	24.2	West	Rural	false	false	null	false	false	true	true	false	false	false	false	false	false	false
HBV_000035	24.4	Southern	Rural	false	false	null	false	true	true	false	false	false	false	false	false	false	false
HBV_000036	29.6	West	Urban	true	false	2.9	false	false	true	false	false	false	false	false	false	false	false
HBV_000037	27.5	Southern	Urban	false	false	null	false	false	false	false	false	false	false	false	false	false	false
HBV_000038	28.2	West	Rural	true	false	3.6	false	false	true	false	false	true	false	false	false	false	false
HBV_000039	37.2	West	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000040	25.9	Southern	Urban	false	false	null	false	true	false	false	false	true	false	false	false	false	false
HBV_000041	18	East	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000042	32	Southern	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000043	19.9	West	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000044	24.7	West	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000045	18.1	West	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000046	28.7	East	Rural	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000047	30.7	East	Rural	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000048	30.1	West	Rural	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000049	27.1	East	Urban	false	false	null	false	true	false	false	false	true	false	false	false	false	false
HBV_000050	27.1	Southern	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000051	28.5	East	Rural	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000052	26.6	West	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000053	24	West	Urban	false	false	null	false	true	true	false	false	false	false	false	false	false	false
HBV_000054	18	East	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000055	30.2	East	Urban	true	false	4.2	false	false	true	false	false	false	false	false	false	false	false
HBV_000056	28.1	West	Urban	true	false	2.4	false	true	true	true	false	true	false	false	false	false	false
HBV_000057	19.5	West	Rural	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000058	27.6	West	Rural	false	false	null	false	true	true	true	false	true	false	false	false	false	false
HBV_000059	27	East	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000060	36.6	West	Rural	false	false	null	false	true	false	false	false	false	false	false	false	false	false
HBV_000061	18.1	East	Urban	false	false	null	false	false	true	true	false	true	false	false	false	false	false
HBV_000062	32.1	West	Rural	true	false	4.7	false	false	false	false	false	false	false	false	false	false	false
HBV_000063	27.2	West	Urban	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000064	39.3	East	Rural	false	false	null	false	false	false	false	false	false	false	false	false	false	false
HBV_000065	30.5	East	Rural	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000066	36.8	West	Rural	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000067	30.1	West	Rural	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000068	22.1	East	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000069	23.3	West	Rural	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000070	26.3	West	Urban	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000071	18	East	Rural	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000072	38.1	East	Urban	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000073	23.8	Southern	Rural	false	false	null	false	false	true	true	false	false	false	false	false	false	false
HBV_000074	30.2	West	Urban	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000075	27.5	East	Rural	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000076	30.3	West	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000077	21.4	West	Urban	true	true	5.9	false	true	true	false	false	false	true	true	false	false	false
HBV_000078	23.9	Southern	Urban	false	false	null	false	false	false	false	false	false	false	false	false	false	false
HBV_000079	33.9	West	Rural	false	false	null	false	true	true	false	false	false	false	false	false	false	false
HBV_000080	24.9	East	Urban	true	false	3.5	false	true	false	false	false	true	false	false	false	false	false
HBV_000081	26.9	West	Urban	false	false	null	false	false	false	false	false	false	false	false	false	false	false
HBV_000082	18	East	Rural	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000083	23.9	West	Rural	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000084	25.8	East	Rural	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000085	23.8	East	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000086	25.9	West	Urban	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000087	32.5	Southern	Rural	false	false	null	false	false	true	false	false	false	false	false	false	false	false
HBV_000088	18	West	Rural	false	false	null	false	false	false	false	false	true	false	false	false	false	false
HBV_000089	23.5	Southern	Rural	false	false	null	false	true	true	false	false	false	false	false	false	false	false
HBV_000090	31.3	East	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000091	22.4	West	Rural	true	false	4	false	false	false	false	false	false	false	false	false	false	false
HBV_000092	33.9	East	Rural	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000093	22.9	East	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000094	29	Southern	Urban	false	false	null	false	false	false	false	false	false	false	false	false	false	false
HBV_000095	41.1	East	Rural	false	false	null	false	false	true	true	false	true	false	false	false	false	false
HBV_000096	24.1	East	Rural	true	false	1.8	false	true	false	false	false	false	false	false	false	false	false
HBV_000097	36.3	East	Urban	false	false	null	false	true	true	false	false	true	false	false	false	false	false
HBV_000098	33.2	Southern	Rural	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000099	27	Southern	Urban	false	false	null	false	false	true	false	false	true	false	false	false	false	false
HBV_000100	26.8	Southern	Rural	false	false	null	false	false	false	false	false	false	false	false	false	false	false

End of preview. Expand in Data Studio

African Hepatitis B MTCT Synthetic Dataset

Mother-to-Child Transmission Prevention

Version: 1.0
Release Date: November 2024
Context: Sub-Saharan Africa (5-12% HBsAg+ pregnant women, 10-20% birth dose coverage)
License: Research & Educational Use

Abstract

We present synthetic datasets for Hepatitis B mother-to-child transmission modeling in Sub-Saharan Africa. With 5-12% HBsAg+ prevalence (West Africa: 8-15%) and only 10-20% birth dose vaccine coverage, MTCT remains a major source of chronic HBV (90% chronicity if infected at birth vs 5% in adults). The datasets model transmission risk factors: maternal HBeAg+ (OR 15.20, 70-90% transmission), high viral load >200K IU/mL (OR 12.50), and prevention interventions (birth dose vaccine: 70-75% efficacy, maternal tenofovir: 90-95% reduction). Long-term outcomes include chronic HBV (90%), cirrhosis (15-25% by age 40), and HCC (10-15% lifetime). Six datasets (25,000 samples total, 4.5 MB) provide antenatal screening scenarios, high-prevalence regions, and intervention impact modeling.

Keywords: Hepatitis B, HBV, MTCT, Mother-to-Child Transmission, Birth Dose Vaccine, Chronic HBV, African Health

Key Features

MTCT Risk Factors (ORs)

Maternal HBeAg+: OR 15.20 (70-90% transmission)
High viral load (>200K IU/mL): OR 12.50
No interventions: 40-50% transmission baseline

Prevention Efficacy

Birth dose vaccine (<24h): 70-75% reduction
Complete 3-dose series: 90-95% prevention
Maternal tenofovir (3rd trimester): 90-95% reduction

Long-Term Outcomes (Infected at Birth)

Chronic HBV: 90%
Cirrhosis by age 40: 15-25%
Hepatocellular carcinoma: 10-15% lifetime
Mortality: 15-25%

African Context

HBsAg+ prevalence: 5-12% (West Africa highest)
Birth dose coverage: 10-20%
Antenatal screening: 20-40%
Viral load testing: <5%

Dataset Inventory

Dataset	N	HBsAg+	MTCT	Birth Dose	Chronic
baseline_1000	1,000	88 (8.8%)	18 (20.5%)	11.1%	16
large_5000	5,000	466 (9.3%)	82 (17.6%)	9.6%	71
extra_large_10000	10,000	903 (9.0%)	159 (17.6%)	9.2%	135
west_high_prev_2000	2,000	270 (13.5%)	43 (15.9%)	9.5%	39
optimal_prevention_2000	2,000	181 (9.0%)	36 (19.9%)	10.7%	31
test_2000	2,000	187 (9.3%)	36 (19.3%)	10.3%	33

Expected Performance

MTCT prediction: AUC 0.88-0.95
Intervention impact: AUC 0.85-0.92
Chronic HBV risk: AUC 0.82-0.90

Citation

African Hepatitis B MTCT Dataset (2024)
Version 1.0, Generated November 2024
Organization: Electric Sheep Africa
License: CC-BY-4.0

Status: Research Use Only
Contact: https://huggingface.co/electricsheepafrica

Downloads last month: 26

Size of downloaded dataset files:

1.81 MB

Size of the auto-converted Parquet files:

239 kB

Number of rows:

17,000