sample_id
stringlengths
12
12
population
stringclasses
7 values
region
stringclasses
5 values
is_SSA
bool
2 classes
is_reference_panel
bool
2 classes
sex
stringclasses
2 values
age_years
float64
18
90
stage_at_diagnosis
stringclasses
4 values
tumor_subtype
stringclasses
5 values
therapy_class
stringclasses
5 values
response_class
stringclasses
5 values
ca153_baseline_u_per_ml
float64
2.81
475
ca153_nadir_u_per_ml
float64
0.8
353
ca153_best_delta_fraction
float64
-0.9
0
ca2729_baseline_u_per_ml
float64
2.98
481
ca2729_nadir_u_per_ml
float64
0.79
315
ca2729_best_delta_fraction
float64
-0.91
0
ctdna_baseline_copies_per_ml
float64
1.41
3.34k
ctdna_min_copies_per_ml
float64
0.13
2.22k
ctdna_baseline_detectable
bool
2 classes
ctdna_cleared_by_6m
bool
2 classes
BT_PAT_00301
SSA_West
West
true
false
Female
53.8
II
HER2_enriched
HER2_targeted
Deep_response
75.44
10.28
-0.863766
74.3
10.48
-0.858987
34.77
3.7
true
false
BT_PAT_00302
SSA_West
West
true
false
Female
51.5
III
Luminal_A
Endocrine_only
Deep_response
69.99
20.36
-0.709059
63.55
21.22
-0.666119
22.82
2.18
true
false
BT_PAT_00303
SSA_West
West
true
false
Female
54.7
III
Luminal_A
Endocrine_only
Early_progression
62.68
62.68
0
66.47
51.09
-0.231435
219.98
219.98
true
false
BT_PAT_00304
SSA_West
West
true
false
Female
58.5
I
Basal_like
Chemo_only
Deep_response
16.43
2.83
-0.828028
16.81
2.49
-0.85195
29.69
4.15
true
false
BT_PAT_00305
SSA_West
West
true
false
Female
58
II
Basal_like
Chemo_only
Partial_response
30.4
13.77
-0.547169
29.49
14.2
-0.518559
133.2
26.99
true
false
BT_PAT_00306
SSA_West
West
true
false
Female
60.4
IV
Luminal_B
Chemo_only
Deep_response
146.53
34.62
-0.763762
152.62
32.05
-0.789988
524.06
26.75
true
false
BT_PAT_00307
SSA_West
West
true
false
Female
59.2
II
Luminal_B
Endocrine_only
Deep_response
21.88
5.16
-0.763931
23.09
4.76
-0.793864
65.21
5.76
true
false
BT_PAT_00308
SSA_West
West
true
false
Female
58
III
Basal_like
Chemo_only
Early_progression
60.65
60.52
-0.002215
60.37
60.37
0
88.92
87.5
true
false
BT_PAT_00309
SSA_West
West
true
false
Female
55.6
IV
HER2_enriched
HER2_targeted
Partial_response
268.56
112.44
-0.58132
267.9
85.02
-0.682638
449.45
104.53
true
false
BT_PAT_00310
SSA_West
West
true
false
Female
46
III
Luminal_B
CDK4_6_plus_endocrine
Stable_disease
44.46
32.46
-0.269984
47.63
28.67
-0.398102
197.32
135.83
true
false
BT_PAT_00311
SSA_West
West
true
false
Male
53.9
II
Luminal_A
Endocrine_only
Partial_response
36.72
12.01
-0.673054
43.83
13.39
-0.694476
23.42
3.48
true
false
BT_PAT_00312
SSA_West
West
true
false
Female
53.5
IV
Basal_like
Chemo_plus_endocrine
Early_progression
50.92
50.92
0
51.82
51.82
0
279.49
172.96
true
false
BT_PAT_00313
SSA_West
West
true
false
Female
33.5
IV
Luminal_B
Endocrine_only
Early_progression
97.14
97.14
0
107.19
107.19
0
106.13
88.71
true
false
BT_PAT_00314
SSA_West
West
true
false
Female
38.9
III
Luminal_A
Chemo_plus_endocrine
Deep_response
83.24
17.25
-0.792822
88.18
16.5
-0.812817
50.81
4.44
true
false
BT_PAT_00315
SSA_West
West
true
false
Female
33.7
IV
Luminal_A
Endocrine_only
Deep_response
116.71
20.27
-0.826363
131.53
23.18
-0.823748
270.59
17.39
true
false
BT_PAT_00316
SSA_West
West
true
false
Female
41.7
III
Basal_like
Chemo_only
Partial_response
45.34
21.38
-0.528513
47.54
19.28
-0.594475
71.44
23.39
true
false
BT_PAT_00317
SSA_West
West
true
false
Female
58.4
II
Basal_like
Chemo_only
Deep_response
9.3
1.71
-0.816182
11
1.43
-0.86973
86.75
7.78
true
false
BT_PAT_00318
SSA_West
West
true
false
Female
53
II
Luminal_B
CDK4_6_plus_endocrine
Deep_response
23.59
4.68
-0.801602
22.07
4.81
-0.782157
38.87
2.46
true
false
BT_PAT_00319
SSA_West
West
true
false
Female
41
IV
Basal_like
Chemo_only
Stable_disease
265.33
210.89
-0.20518
279.01
214.79
-0.230185
63.65
46.62
true
false
BT_PAT_00320
SSA_West
West
true
false
Female
49.5
III
Basal_like
Chemo_only
Early_progression
20.51
18.9
-0.078827
19.95
15.12
-0.241965
85.23
85.23
true
false
BT_PAT_00321
SSA_West
West
true
false
Female
49.6
III
Luminal_B
Chemo_only
Deep_response
68.32
15.19
-0.777666
69.93
12.64
-0.819185
67.66
5.99
true
false
BT_PAT_00322
SSA_West
West
true
false
Female
45.2
III
Basal_like
HER2_targeted
Partial_response
46.1
19.58
-0.575271
37.3
20.81
-0.442115
600.76
120.9
true
false
BT_PAT_00323
SSA_West
West
true
false
Female
41.1
IV
HER2_enriched
HER2_targeted
Stable_disease
304.08
248.58
-0.1825
315
203.48
-0.354046
183.73
142.51
true
false
BT_PAT_00324
SSA_West
West
true
false
Female
47.9
III
Basal_like
CDK4_6_plus_endocrine
Partial_response
67.64
38.21
-0.435184
67.01
36.9
-0.449325
112.45
31.04
true
false
BT_PAT_00325
SSA_West
West
true
false
Female
56
III
Basal_like
Chemo_only
Partial_response
55.85
19.4
-0.652681
54.14
18.08
-0.665966
498.52
125.6
true
false
BT_PAT_00326
SSA_West
West
true
false
Female
50.4
III
Luminal_A
Endocrine_only
Partial_response
64.12
26.37
-0.588735
64.32
24.68
-0.616275
354.4
77.62
true
false
BT_PAT_00327
SSA_West
West
true
false
Female
56.3
IV
Luminal_A
HER2_targeted
Late_progression
61.25
46.96
-0.233298
57.5
41.7
-0.274909
225.9
146.07
true
false
BT_PAT_00328
SSA_West
West
true
false
Female
67.7
III
Basal_like
Chemo_only
Partial_response
101.4
36.9
-0.636056
99.94
35.79
-0.641909
43.42
7.47
true
false
BT_PAT_00329
SSA_West
West
true
false
Female
59.4
I
Basal_like
Chemo_only
Deep_response
4.31
1.4
-0.675727
4.95
1.28
-0.740681
21.16
1.69
true
true
BT_PAT_00330
SSA_West
West
true
false
Female
60.7
II
Basal_like
Chemo_only
Deep_response
100.76
22.38
-0.77785
107.63
23.7
-0.779803
79.7
7.82
true
false
BT_PAT_00331
SSA_West
West
true
false
Female
43
III
Basal_like
Chemo_only
Stable_disease
66.44
44.43
-0.331237
61.06
37.94
-0.378747
104.97
81.55
true
false
BT_PAT_00332
SSA_West
West
true
false
Female
68
IV
Luminal_B
Chemo_only
Partial_response
89.62
47.01
-0.475487
77.04
42.94
-0.442688
162.03
40.07
true
false
BT_PAT_00333
SSA_West
West
true
false
Female
50.3
III
HER2_enriched
Chemo_only
Deep_response
58.85
12.16
-0.793362
47.75
13.02
-0.727274
289.76
26.15
true
false
BT_PAT_00334
SSA_West
West
true
false
Female
53.4
III
HER2_enriched
HER2_targeted
Early_progression
44.82
44.82
0
40.48
40.48
0
37.64
37.64
true
false
BT_PAT_00335
SSA_West
West
true
false
Female
23.9
IV
Basal_like
Chemo_only
Late_progression
132.35
84.49
-0.361618
145.04
96.12
-0.33732
181.17
103.39
true
false
BT_PAT_00336
SSA_West
West
true
false
Female
42.5
III
Luminal_A
CDK4_6_plus_endocrine
Deep_response
62.02
11.56
-0.813635
56.51
10.86
-0.80778
71.73
6.82
true
false
BT_PAT_00337
SSA_West
West
true
false
Female
51.9
III
Luminal_A
Chemo_plus_endocrine
Early_progression
58.8
58.8
0
58.55
58.55
0
111.07
94.26
true
false
BT_PAT_00338
SSA_West
West
true
false
Female
40.3
III
Luminal_A
Endocrine_only
Stable_disease
26.84
23.13
-0.138026
26.65
19.75
-0.259063
60.6
46.52
true
false
BT_PAT_00339
SSA_West
West
true
false
Female
45.5
I
Basal_like
Chemo_only
Stable_disease
13.22
10.03
-0.241198
13.21
9.01
-0.318177
44.53
30.31
true
false
BT_PAT_00340
SSA_West
West
true
false
Female
43.8
IV
Basal_like
Chemo_plus_endocrine
Partial_response
88.32
48.4
-0.451932
89.79
44.15
-0.508333
265.45
75.48
true
false
BT_PAT_00341
SSA_West
West
true
false
Female
66.6
I
Basal_like
CDK4_6_plus_endocrine
Partial_response
26.45
8.39
-0.682769
22.86
7.69
-0.663679
3.32
0.86
false
false
BT_PAT_00342
SSA_West
West
true
false
Female
44.7
II
Luminal_A
Chemo_plus_endocrine
Partial_response
23.75
8.25
-0.652645
21.84
9.68
-0.556653
32.66
6.57
true
false
BT_PAT_00343
SSA_West
West
true
false
Female
39.3
I
Luminal_A
Endocrine_only
Deep_response
5.83
1.35
-0.767755
5.64
1.45
-0.743116
20.24
1.61
true
true
BT_PAT_00344
SSA_West
West
true
false
Female
54.3
II
Luminal_A
CDK4_6_plus_endocrine
Stable_disease
25.64
19.97
-0.221099
28.58
20.66
-0.277274
38.2
38.2
true
false
BT_PAT_00345
SSA_West
West
true
false
Female
40.2
III
Basal_like
Chemo_only
Partial_response
62.56
27.65
-0.557916
61.68
29.41
-0.523239
126.13
25.65
true
false
BT_PAT_00346
SSA_West
West
true
false
Female
61.7
II
Luminal_A
Endocrine_only
Partial_response
24.62
11.35
-0.538946
21.56
9.03
-0.581347
32.23
10.6
true
false
BT_PAT_00347
SSA_West
West
true
false
Female
38.9
I
Luminal_A
Endocrine_only
Deep_response
10.68
2.17
-0.797321
12.87
2.32
-0.819742
33.93
3.35
true
false
BT_PAT_00348
SSA_West
West
true
false
Female
52.7
I
HER2_enriched
HER2_targeted
Deep_response
13.03
2.08
-0.840032
13.94
2.17
-0.843978
11.39
0.97
true
true
BT_PAT_00349
SSA_West
West
true
false
Female
41
III
Luminal_A
Chemo_plus_endocrine
Partial_response
140.35
52.89
-0.623181
151.37
49.17
-0.675146
105.28
18.85
true
false
BT_PAT_00350
SSA_West
West
true
false
Female
51.7
III
Basal_like
Chemo_plus_endocrine
Early_progression
34.28
34.28
0
35.03
35.03
0
25.94
25.94
true
false
BT_PAT_00351
SSA_West
West
true
false
Female
59.8
I
Luminal_A
Chemo_plus_endocrine
Partial_response
9.43
3.19
-0.661589
10.83
3.24
-0.700478
29.56
7.99
true
false
BT_PAT_00352
SSA_West
West
true
false
Female
44.8
IV
Luminal_B
Chemo_plus_endocrine
Deep_response
74.25
17.97
-0.757986
77.32
18.67
-0.758511
232.7
23.02
true
false
BT_PAT_00353
SSA_West
West
true
false
Female
66.1
III
Luminal_A
Chemo_only
Deep_response
98.13
18.65
-0.810001
103.72
17.54
-0.830918
578
53.09
true
false
BT_PAT_00354
SSA_West
West
true
false
Female
66.6
II
Basal_like
Chemo_only
Deep_response
34.6
7.34
-0.788005
38.51
7.98
-0.792654
145.7
15.25
true
false
BT_PAT_00355
SSA_West
West
true
false
Female
49.1
I
Luminal_B
Chemo_plus_endocrine
Partial_response
14.08
7.36
-0.477156
16.04
7.05
-0.560443
10.18
2.73
true
true
BT_PAT_00356
SSA_West
West
true
false
Female
53.2
II
Basal_like
Chemo_only
Partial_response
38.33
21.64
-0.435309
42.43
18.52
-0.563632
25.87
5.92
true
false
BT_PAT_00357
SSA_West
West
true
false
Female
41.5
IV
Luminal_B
Chemo_plus_endocrine
Deep_response
61.58
18.66
-0.696917
64.49
17.07
-0.735285
116.24
12.06
true
false
BT_PAT_00358
SSA_West
West
true
false
Female
70.3
III
Basal_like
Chemo_only
Late_progression
59.47
36.28
-0.389959
60.63
33.41
-0.44901
249.19
116.18
true
false
BT_PAT_00359
SSA_West
West
true
false
Female
71.1
III
HER2_enriched
HER2_targeted
Partial_response
51.25
21.58
-0.578864
46.48
20.97
-0.548844
187.26
53.99
true
false
BT_PAT_00360
SSA_West
West
true
false
Female
57.8
III
Basal_like
Chemo_only
Partial_response
50.39
20.35
-0.596226
54.17
16.95
-0.687106
44.41
13
true
false
BT_PAT_00361
SSA_West
West
true
false
Female
66.2
I
HER2_enriched
HER2_targeted
Partial_response
14.01
6.83
-0.512565
13.59
6.78
-0.501216
6.91
2.08
true
true
BT_PAT_00362
SSA_West
West
true
false
Female
53.4
III
Luminal_A
Chemo_plus_endocrine
Early_progression
22.37
22.37
0
21.98
21.98
0
92.92
59.37
true
false
BT_PAT_00363
SSA_West
West
true
false
Female
46.7
III
Basal_like
Chemo_only
Early_progression
75.89
66.95
-0.117784
73.08
69
-0.055879
68.96
68.96
true
false
BT_PAT_00364
SSA_West
West
true
false
Female
62.7
II
Luminal_A
CDK4_6_plus_endocrine
Deep_response
39.14
10.33
-0.735989
39.43
9.96
-0.747501
81.44
4.92
true
false
BT_PAT_00365
SSA_West
West
true
false
Female
30.8
IV
Basal_like
Chemo_only
Late_progression
39.87
26.8
-0.327789
39.49
25.35
-0.358057
271.54
138.79
true
false
BT_PAT_00366
SSA_West
West
true
false
Female
42.6
III
Basal_like
Chemo_only
Late_progression
42.1
28.55
-0.32182
44.17
30.01
-0.320489
159.4
114.05
true
false
BT_PAT_00367
SSA_West
West
true
false
Female
49.4
II
Basal_like
Chemo_only
Stable_disease
14.97
12.43
-0.169871
16.55
11.87
-0.28311
72.49
41.12
true
false
BT_PAT_00368
SSA_West
West
true
false
Male
28.2
I
Basal_like
Chemo_plus_endocrine
Partial_response
10.94
4.99
-0.543623
11.63
4.44
-0.618692
11.16
3.24
true
false
BT_PAT_00369
SSA_West
West
true
false
Female
57.9
IV
Basal_like
Chemo_only
Stable_disease
84.91
63.83
-0.248199
88.48
58.46
-0.339253
165.74
153.3
true
false
BT_PAT_00370
SSA_West
West
true
false
Female
58
II
Basal_like
Chemo_only
Partial_response
31.27
15.18
-0.514383
30.09
12.95
-0.569567
26.17
7.65
true
false
BT_PAT_00371
SSA_West
West
true
false
Female
47.3
II
Basal_like
Chemo_only
Partial_response
31.83
14.56
-0.542416
29.28
12.84
-0.561616
11.97
2.88
true
false
BT_PAT_00372
SSA_West
West
true
false
Female
48.6
II
Luminal_A
Chemo_only
Partial_response
15.58
7.32
-0.530087
20.76
6.1
-0.706091
35.81
9.75
true
false
BT_PAT_00373
SSA_West
West
true
false
Female
41.9
IV
Luminal_A
Endocrine_only
Deep_response
131.78
30.15
-0.771246
139.07
28.69
-0.793735
304.02
19.01
true
false
BT_PAT_00374
SSA_West
West
true
false
Female
50.1
III
Luminal_A
Chemo_plus_endocrine
Early_progression
51.58
51.58
0
54.7
54.7
0
274.46
274.46
true
false
BT_PAT_00375
SSA_West
West
true
false
Female
44.8
II
Luminal_B
CDK4_6_plus_endocrine
Deep_response
67.47
15.4
-0.771731
54.75
15.04
-0.725274
34.14
3.66
true
false
BT_PAT_00376
SSA_West
West
true
false
Female
58.1
III
Luminal_A
Endocrine_only
Late_progression
21.44
20.42
-0.047571
20.8
20.8
0
72.97
32.9
true
false
BT_PAT_00377
SSA_West
West
true
false
Female
47.8
III
Luminal_B
Chemo_plus_endocrine
Partial_response
34.33
11.1
-0.676625
38.79
11.96
-0.691591
143.16
33.43
true
false
BT_PAT_00378
SSA_West
West
true
false
Female
59.8
I
Basal_like
Chemo_only
Deep_response
14.01
2.97
-0.788328
14.2
2.9
-0.795933
19.9
1.61
true
false
BT_PAT_00379
SSA_West
West
true
false
Female
21
III
Luminal_A
Chemo_plus_endocrine
Stable_disease
46.24
41.43
-0.104043
51.7
42.05
-0.186591
70.71
52.82
true
false
BT_PAT_00380
SSA_West
West
true
false
Female
36.3
III
Basal_like
Chemo_only
Partial_response
118.65
46.28
-0.609956
97.41
48.43
-0.502868
526.95
138.38
true
false
BT_PAT_00381
SSA_West
West
true
false
Female
48.2
IV
Basal_like
Chemo_only
Partial_response
69.48
23.25
-0.665373
62.45
21.82
-0.650603
105.37
29.8
true
false
BT_PAT_00382
SSA_West
West
true
false
Female
83.4
II
Basal_like
Chemo_only
Deep_response
11.89
2.46
-0.793423
12.14
2.4
-0.802543
58.85
6.51
true
false
BT_PAT_00383
SSA_West
West
true
false
Female
35.3
I
Luminal_A
Endocrine_only
Partial_response
23.04
11.66
-0.493769
22.24
9.72
-0.562943
40.84
9.96
true
false
BT_PAT_00384
SSA_West
West
true
false
Female
73.7
IV
Luminal_A
Endocrine_only
Deep_response
134.27
23.22
-0.827067
141.84
23.25
-0.836055
1,141.1
82.66
true
false
BT_PAT_00385
SSA_West
West
true
false
Female
55
IV
Luminal_A
Endocrine_only
Early_progression
67.86
67.86
0
69.13
69.13
0
361.02
267.09
true
false
BT_PAT_00386
SSA_West
West
true
false
Male
64.7
IV
Luminal_A
Endocrine_only
Late_progression
130.52
82.65
-0.366742
127.1
77.84
-0.387567
1,008.89
526.18
true
false
BT_PAT_00387
SSA_West
West
true
false
Female
44.1
III
Basal_like
HER2_targeted
Early_progression
101.4
101.4
0
102.29
102.29
0
258.26
258.26
true
false
BT_PAT_00388
SSA_West
West
true
false
Female
55.3
III
Luminal_B
CDK4_6_plus_endocrine
Partial_response
41.16
15.1
-0.633206
35.9
16.51
-0.540034
76.47
22.13
true
false
BT_PAT_00389
SSA_West
West
true
false
Female
51.1
III
Luminal_A
Chemo_only
Deep_response
58.54
9.53
-0.837257
58.02
9.13
-0.842707
316.99
25.18
true
false
BT_PAT_00390
SSA_West
West
true
false
Female
44.1
II
Luminal_A
Chemo_plus_endocrine
Deep_response
41.85
14.63
-0.650493
40.6
12.75
-0.686034
104.4
8.32
true
false
BT_PAT_00391
SSA_West
West
true
false
Female
45.4
III
Basal_like
Chemo_only
Stable_disease
80.55
48.91
-0.392832
91.01
61.13
-0.328308
149.93
145.93
true
false
BT_PAT_00392
SSA_West
West
true
false
Female
50.1
IV
Luminal_B
CDK4_6_plus_endocrine
Partial_response
65.31
33.67
-0.484496
65.41
32.16
-0.508414
294.5
146.97
true
false
BT_PAT_00393
SSA_West
West
true
false
Female
55.7
I
Basal_like
Chemo_only
Deep_response
15.03
3.35
-0.777437
16.08
3.37
-0.790388
31.26
2.1
true
false
BT_PAT_00394
SSA_West
West
true
false
Female
54.9
IV
Basal_like
Chemo_only
Partial_response
242.53
82.72
-0.658925
192.1
72.86
-0.620728
403.71
119.86
true
false
BT_PAT_00395
SSA_West
West
true
false
Female
40.2
III
Basal_like
Chemo_only
Partial_response
27.05
10.63
-0.606915
26.78
12.37
-0.537952
56.6
13.14
true
false
BT_PAT_00396
SSA_West
West
true
false
Female
54.1
II
Basal_like
Chemo_plus_endocrine
Deep_response
31.33
6.6
-0.789175
30.62
7.13
-0.767058
12.4
1.18
true
false
BT_PAT_00397
SSA_West
West
true
false
Female
48.7
I
HER2_enriched
CDK4_6_plus_endocrine
Deep_response
39.49
8.45
-0.785968
40.87
8.07
-0.802584
15.98
1.78
true
false
BT_PAT_00398
SSA_West
West
true
false
Female
30.7
IV
Luminal_A
Chemo_only
Early_progression
124.56
124.56
0
112.37
112.37
0
838.84
740.07
true
false
BT_PAT_00399
SSA_West
West
true
false
Female
65.9
III
Basal_like
Chemo_plus_endocrine
Deep_response
35.15
8.92
-0.746171
40.45
8.44
-0.791214
23.82
4.93
true
false
BT_PAT_00400
SSA_West
West
true
false
Female
54.1
IV
Basal_like
Chemo_only
Partial_response
95.71
42.24
-0.558669
118.5
40.97
-0.654293
910.56
206.59
true
false