Dataset Viewer
id
stringlengths 1
4
| sequence
stringlengths 27
237
| secondary_structure
stringlengths 27
237
|
|---|---|---|
0
|
AACUUUCAGCAAUGGAUGUCUUGGCUCACGCAUCGAUGAAGGACGCAGCGAAAUGCGAUACGCAUUGUGAAUUGCAGAUUUCAGUGAACCAUCAGAUUUCUGAACGCACAUGGCGCUGCUGGUAUUUUGCCCGCAGCACGUCUGUUUCAGUGUCU
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((.....)))))))))..................
|
1
|
AAUUUUCAGCAAUGGAUGUCUUGGCUCGCGCAACGAUGAAGGACGCAGCGAACUGCGAAACGCAAUGUGGAAUUGCAGAAUUCAGUGAAUCAUCAGAUUUCUGAACGCAAUGCACCUGGGAUAUCUCCUGGUACGUCUGUUUCAGUGUCU
|
.......................................((((((((......)))).......(((.....((....))..........)))......))))...(((.)))(((((((.....)))))))..................
|
2
|
AAUUUUCAGCAAUGGAUGUCUUGGCUCGCGCAACGAUGAAGGACGCAGCGAACUGCAAACGCAAUGUGAAUUGCAGAAUUCAGUGAAUCAUCAGAUUUCUGAACGCAAAUGGCACCUUGGGGAUAUUCUCCUUGGUACGUCUGUUUCAGUGUCU
|
.......................................((((.(((......))).......(((....((....))..........)))......))))...(((...)))(((((((((.....)))))))))..................
|
3
|
AAUUUUCAACGAUGGAUGUCUUGGCUCCCAUAUCGAUGAAGAACGCAGCUAGAAUGCGAUAUGCAGUGUGAAUUGCAGAACCACGAAUCAUCGGAUCUUUGAACGCAACUGGCGCUGAUAAACUCAGCAUACUUGCUUCAGUGUGC
|
.......................................((((((((.......)))).......(((....((....))........)))......))))...(((...)))(((((.....)))))..................
|
4
|
AACCUUCAACGGUGGAUGUCUUGGCUCUCAUAUCGAUGAAGAACGCAGCAAAGUGCGAUAAGCAAUGCGAAUUGCAGACCGUGAGUCAUUAGAAUUUCGAAAGCAAUCUGCACCUCCGCCUAGCGAGAGGUAUGUCUGCUUCAGUGUUC
|
.......................................((((((((......)))).......(((....(.....)........)))......))))...(((...)))(((((((((..)))))))))..................
|
5
|
AACUUUCAGCAAUGGAUCUCUUGGCUCUUGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAACGCGAGUCAUCGAAAUUUUGAACGCACAUUGCACUUGGUGGCAUUCCGCCAAGUAUGUUUGUUUGAGUGUCU
|
.......................................((((((((......)))).......(((....(.....)........)))......))))...(((...)))(((((((((....)))))))))..................
|
6
|
AACUUUUAACAACGGAUCUCUUGGCUCUAGCAUCGAUGAAGAACGCAGCGAAACGCGAUAUGUAGUGUGAAUUGCAGAAUUCAGUGAAUCAUCGAAUCUUUGAACGCACAUGGCGCCUUCCAGUAUCCUGGGAGGCAUGCCUGUCCGAGCGUCG
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
7
|
AACUUUCAACAACGGAUCUCUUGGUUCUGGCAUCGAUGAAGAACGCAGCGAAAUGCGAUAAGUAAUGUGAAUUGCAGAAUUCAGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCGCCGGUAUUCCGGCGGGCAUGCCUGUUCGAGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
8
|
AACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAUUGCGAUAAGUAUUGUGAAUUGCAGAUUUUCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGUCCUCUGGUAUUCCAGGGGGCAUGCCUGUUUGAGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
9
|
AACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCCUUGGUAUUCCAGGGGGCAUGCCUGUUUGAG
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).............
|
10
|
AACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCCUUGGUAUUCCAGGGGGCAUGCCUGUUUGAGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
11
|
AACUUUCAGCAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAUUGCGAUAAGUAAUGUGAAUUGCAGAUUUUCGUGAAUCAUCGAAUCUUUGAACGCAUAUUGCGCUCUAUAGUAUUCUAUAGAGCAUGCCUGUUUGAGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
12
|
AACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCCGAUACGUAAUAUGAAUUGCAGAUAUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCUCUGGUAUUCCGGAGGGCAUGCCUGUUUGAGCGUCG
|
.......................................((((((((......)).)).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
13
|
AACUUUCAGCAAUGGAUCUCUUGGUUCCCGCGUCGAUGAAGAACGUGGCAAAAUGCGAUAAGUAGUGUGAAUUGCAGAAUUCAGUGACUCAUCGAAUUUUUGAACGCAUAUUGCGCUCCUCAGUAUUCUGUGGAGCAUGCCUGUUUGAGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
14
|
AACUUUCAGCAACGGAUCUCUUGGCUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCUUUGGGUUAUUCCCAAAGGCAUGCCUGUUUGAGUGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((.....)))))))))..................
|
15
|
AACUUUCAACAACGGAUCUCUUGGCUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUAAGUAAUGUGAAUUGCAGAAUUCAGUGAAUCAUCGAAUCUUUGAACGCACCUUGCGCUCCUUGGUAUUCCGAGGAGCAUGCCUGUUUGAGUGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
16
|
AACUUUCAACAACGGAUCUCUUGGCUUCCACAUCGAUGAAGAACGCAGCGAAAUGCGAUAAGUAAUGUGAAUUGCAGAAUUCAGUGAAUCAUCGAGUCUUUGAACGCAACUUGCGCCCUUUGGUAUUCCGAAGGGCAUGCCUGUUUGAGAGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
17
|
AACCCUAGGCAGGGGAUCACUCGGCUCAUGGAUCGAUGAAGACCGCAGCUAAAUGCGCGUCAGAAUGUGAACUGCAGGACACAUGAACACCGACACGUUGAACGAUAUUGCGCAUUGCACGACUCAGUGCGAUGUACACAUUUUUGAGUGCCC
|
.......................................((((((((......)))).......(((....((....))........)))......))))...((...).)(((((((((......)))))))))..................
|
18
|
GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAGUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACCUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGGGUCG
|
.......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((.....)))))))))..................
|
19
|
GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG
|
.......................................((((((((......)))).......(((....((....)).........)))......))))...(((..)))(((((((((.....)))))))))..................
|
20
|
GACUCUCAACGGUGGAUCACUCGGCUCGCGAGUCGAUGAAGGACGCAGCUAAGUGCGAGAAGUGGUGUGAAUUGCAGAACACAUUGAACGUCGACCUUCGAACGCGAAUGGCGGUCUCGGGUUAAUCCGGGACCACGUCUGCCUCAGGGUUG
|
.......................................((((((((......)))).......(((....((....)).........))).....))))...(((...)))(((((((((....)))))))))..................
|
21
|
GACUCUUAACGGUGGAUCACUCGGCUCGCGAGUCGAUGAAGGACGCAGCCAAGUGCGAGAAGUAAUGUGAAUUGCAGAACACAUUGAACGUCGACCUUCUGAACGCGAAUUGCGGUCUCGGGUCAAUCCCGGGACCGCGUCUGCCUCAGGGUCG
|
.......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((.....)))))))))..................
|
22
|
AUCUCUUAGCGGUGGAUCACUCGGCUCGAGCGUCGAUGAAGGACGGAGCUAGCUCCGAGAAGUAAUGUGAAUUGCAGGACACAUUGAGCAUCGAUAUUCUGAACGCGUAUUGCGGCCUCGGGUAAUCCUGGGGCCACGUCCGUCUCAGGGUCU
|
.......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((....)))))))))..................
|
23
|
UAGCUUCAGCGAUGGAUCGGUUGCAUCGAGUAUCGAUGAAGAACGCAGCUUGCUGCGUUACUUACCACGAAUUGCAGACGCUUAGAGUGGUGAAAUUUCGAACGCAUAGCACCAACUGGGCCUCCAGUUGGUACGUCUGGUUCAGGGUUG
|
.......................................((((((((......)))).......(((....(.....).........)))......))))...((...))(((((((((....)))))))))..................
|
24
|
AACUCGUAACGGUGGAUGUCUCGGCUCCUACAUCGAUGAAGAACGUAGCAAACUGCGAAACGUAAUGCGAAUUGCAGAACUCGUGAAUCAUCAAAUUUUUGAACGCAAGUGGCGCUCGCGGGUAACCCUGCGAGCAUGUCUGUUUGAGUGUCC
|
.......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((....)))))))))..................
|
25
|
AACUCGUGACGGAGGAUAUCUUGGCUCCCACAUCGAUGAAGAACGCAGCAAAAUGCGAUACGUAGUGUGAAUUGCAGAACAUGUGAAUCAUCGAAUUUUUGAACGCAAGUGGCGCUCGCGGGCAAUCCUGCGAGCAUGUCUGUUUGAGUGUCC
|
.......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((....)))))))))..................
|
26
|
AACUCUCAGCAACGGAUAUCUUGGCUCUUGCAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAGUGUGAAUUGCAGAAUUCCGCGAAUCAUCGAGUUUUUGAACGCAAGUUGCGCCCGAGGCUCGUCCGAGGGCAUUCCUGCCAGAGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))((((((((.....))))))))..................
|
27
|
GACUCUCAGCAACGGAUAUCUUGGCUCCCGCAACGAUGAAGAACGCAGCGAAAUGCGAUAUCUAGUGUGAAUUGCAGAAUUCCGCGAAUCAUCGAGUUUUUGAACGCAUGUUGCGCCCGAGGCUUUGCCGAGGGCAUGUCUGCCUGAGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((...)))))))))..................
|
28
|
GACUCUCGGCAACGGAUAUCUCGGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACCUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCGAGGCCAUCCGGCCGAGGGCACGCCUGCCUGGGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((......)))))))))..................
|
29
|
GACUCUCGGCAACGGAUAUCUCGGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCGAAGCCACUAGGGCACGUCUGCCUGGGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((....)))))))..................
|
30
|
GACUCUCGGCAACGGAUAUCUCGGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCGAAGCCGUUACGCGAGGGCACGUCUGCCUGGGCGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))((((((.((......))))))))..................
|
31
|
GACUCUCGGCAACGGAUAUCUCGGCUCUCACAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCCAAGCCUUCUGGCCGAGGGCACGUCUGCCUGGGUGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((......)))))))))..................
|
32
|
GACUCUCGGCAACGGAUAUCUUGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAAGAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCCAAGCCUUCUGGCCGAGGGCACGUCUGCCUGGGUGUCA
|
......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((......)))))))))..................
|
33
|
GACUCUCGGCAACGGAUAUCUCGGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCCAAGCCUUCUGGCCGAGGGCACGUCUGCCUGGGUGUCA
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((......)))))))))..................
|
34
|
AACUUUUAGCAAUGGAUGUCUUGGGUCACACAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGCGAAUUGCAGAACUUCGUGAAUCAUCAAAAUUUUGAACGCACAUUGCGCUACUGAGUAAUCUCAGUAGCAUGCUUAUCUGAGUGUCU
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
35
|
AACUUUCAGCAACGGAUGUCUUGGCUCCCACAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGCGAAUUGCAGAAUUCCGCGAGUCAUCAAACCUUUGAACGCACCUUGCGCUUUCGGGAUAUGCCCGUUAGCAUGUUUGUUGGAGUGUCU
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((.....)))))))))..................
|
36
|
AACUUUCAGCGAUGGAUAUCUUGGCUCUCGCAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGCGAAUUGCAGAAUUCAGUGAAUCAUCAAAACUUUGAACGCAAAUUGCGCUUCCGGGUAUCCCUGGGAGCAUGCCUGUAUGAGUGUCU
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
37
|
AACUUUCAGCAGUGGAUGUCUAGGCUCGCACAUCGAUGAAGAACGCUGCGAACUGCGAUACGUAAUGCGAAUUGCAGGAUUCAGUGAGUCAUCGAAAUUUUGAACGCAUAUUGCACUUCCGGGUUAGUCCUGGGAGUAUGCCUGUAUCAGUGUCC
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((.....)))))))))..................
|
38
|
AACUUUCAGCGACGGAUGUCUUGGCUCCCACAACGAUGAAGAACGCAGCGAAAUGCGAUACGUCUUGCGACUUGCAGAAUCCAGUGAAUCAUCAAAACUUUGAACGCAUCUGCGUUCCGGGAUAUGCCUGGGAGCAUGCUUGUCGGAGUGUCU
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((..)))((((((((.....))))))).)..................
|
39
|
AACUUUCAGCGACGGAUAUCUAGGCUCCCACAACGAUGAAGAACGCAGCGAAAUGCGAUACGUCUUGCGACUUGCAGAACCCAGUGAAUCAUCAAACCUUCGAACGCACCUUGCGCUCUCGGGCAUUCCCGGGAGCAUGCUUGUCGGAGUGUCC
|
.......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))..................
|
40
|
CACUUUCAGCAACGGAUGUCUCGGUUCCCAUAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGCGAAACGCAUCAGUAGUGAGUCAUCGAAACUUUGAACGCAACUUGCACUUCCCUUUGGGGAGUAUAUCUAUUGGAGUGUCU
|
.......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))((((((.....))))))..................
|
41
|
AUACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
42
|
AUACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
43
|
ACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG
|
.........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
44
|
AUACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
45
|
AUACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
46
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCAUGAAGGUGGUUUUCCCAGGGCGAGGCUCACCCAUUUGCACUGUUGGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGAUGCAAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG
|
...........(((.((((((.(((((..........))))))))))).(((......(((.((............))..)).).....)))..(((.((.((.......))))...))).)))..............(((((.(((((....))))).))))).
|
47
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUCACCCAUUGCACUUUGGGGUGUGCUGACCCCUGCGAUUUCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGAGCUGCGUUCGCGCGCCCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........))..)).).....)))..(((.((.((......))))...))).))))...............(((((..(((((....))))).))))).
|
48
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCAUGAAGGUGGUUUUCCCAGGGCGAGGCUCACCCAUUGCACUUUGGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........))..)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
49
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGUGUAUCCAUUGCAUCCGGAUGUGCUGACCACUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUUGUGCUCUCCCCUU
|
...........((((((((((.(((((..........))))))))))).(((......(((.((.........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
50
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCAUGAAGGUGGUUUUCCCAGGGCGAGGCUCACCCAUUGCACUUUGGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........))..)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
51
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
52
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
53
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
54
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
55
|
AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))).
|
56
|
AUACUUACCUGGCGCAGGGGUAGCAUUGAUCAAGAAGGAUGCACCCCCAGGACGAGGCUUGCUAUUGCACACCGGCUCGCUGAAGCUUGCGAUUCCCUCAAACGUAGGGAACUCGGGCGUAUUAUUUAUGGUAGCGGGGAUCUGCGUUCGCGCUAUCCCCUU
|
...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))).
|
57
|
AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUAUUAUUUAUGGUAGCGGAGAUCUGCGUUCGCGCUAUCUCCUA
|
...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))).
|
58
|
AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUAUUAUUUAUGGUAGCGGAGAUCUGCGUUCGCGCUAUCUCCU
|
...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....)))))))))).
|
59
|
AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUACAAUUUAUGGUAGCGGAGAUCUGCGUUCGCGCUAUCUCCUA
|
...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))).
|
60
|
AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUACAAUUUAUGAUAGCGGAGAUCUGCGUUCGCGCUAUCUCCUA
|
...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))).
|
61
|
AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUACAAUUUAUGGUAGCGGAGAUCUGCGUUCGCGCUAUCUCCUA
|
...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))).
|
62
|
AAACUUACCUGGCUGGGGGUUAUUUCGCGAUCACAAAGGCGGAAUCCCCAUGGUUAGGCCUACCCAUUGCACUUUUGGUGCGGGCUGACCUGUGUGGCAGUCUCGAGUUGAGAUUCGCCAACAGCUUAAUUUUUGCGUAUCGGGGCUGCGUGCGCGCGGCCCUGA
|
...........((((((((((..(((((..........))))))))))).(((......(((.((...........))..)).).....)))..(((.((.((.......)).))..))).))))...............((((((((((....)))))))))).
|
63
|
AAACUUACUUGGCGCCGGGACCAGGGUGAUCACGAAUGCCCUGGCCCCAGGUGGAGGCUCGCCAUUGCACUCCGGCGUGUUGAAGCCUGCGACGAUCCCUAAUUGGGUGCGCUCGGACGCGUAGUUUUUGUCAGUGGGGAGGUCUUCGGAUCAUCCUU
|
...........((((((((((.(((((..........))))))))))).(((......(((((..........)))).).....)))..(((.((.((......)).))...))).))))...............(((((((((....)))).)))))
|
64
|
AUACUUACCUGGACGGGGUCAAUGGGCGAUCAAUAAGACCUAUGGCCUAGGCUUGUGACCUCCAUUGCACUUUGGAGGGGUGCCUGCCUAAGGUCGGCCCAAGUGGUCGAGCCUACGUCAUAAUUUGUUACAGCGGGGGCCUGCGUUCGCGCGGCCCUACC
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))).
|
65
|
AUACUUACCUGGACGGGGUCAAUGGGCGAUCAAUAAGACCUAUGGCCUAGGCUUGUGACCUCCAUUGCACUUUGGAGGGGUGCCUGCCUAAGGUCGACCCAAGUGGUCGAGCCUACGUCAUAAUUUGUUGCUGUGGGGGCCUGCGUUCGCGCGGCCCUGCC
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))).
|
66
|
AUACUUACCUGGACGGGGUUAAUGGGCGAUCAAUAAGACCCAUGGGCCUAGGUUGGUGACCUCCAUUGCACUUUGGAGGGGUGCCUACCUAAGGUCGGCUCAAGUAGUCGAGCCUACGUCAUAAUUUGUUGCAGUGGGCCUGCGUUCGCGCGGCCCCUAC
|
...........((((((((((.(((((..........))))))))))).(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............((((.(((((....))))).))))..
|
67
|
AUACUUACCUGGACGGGGUCAAUGGGUGAUCAAUAAGACCCAAUGACCCAGGCUUGUGACCUACAUUGCACUUUGGAGGGGUGCCUGCCUAAGGUCAGCCCAAGUGGUUGAGCCUAUGUCAUAAUUUGUUGCAGUGGGUGCCUGUGUUUGCGCACGCCCUAC
|
...........((((((((((.(((((..........))))).))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))).
|
68
|
AUACUUACCUGGACGGGGUCAAUGGGCGAUCAAUAAGACCCAUGGCCUAGGCUUGUGACCUCCAUUGCACUUUGGAGGGGUGCCUGCCUAAGGUCGACCUAAGUGGUCGGGCCUAUGUCAUAAUUUGUUGCUGUGGGGGCCUGCGUUCUGCGCGCCCCUG
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((...))))).))))).
|
69
|
UUACUUACCUGGACGGGGUCAAUGGGCAAUCAAUAAGACCCAUGGCCUAGGUUGGUGACCUCCAUUGCACUUUGGAGGGGUGCCUUCCUAAGGUCGACCCAAGUGGUCGAGCCUAUGUCAUAAUUUGUUGCAGUGGGGGCCAGCGUUCGCGCGGCCCCUAC
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))).
|
70
|
AUACUUACCUGGACGGGGUCAAUGGGUAAUCAAGAAGUUCCAUGGCCUAGGUUGGUGACCUCCAUUGCACUAAGGAGGGGUGCUUGCCUAAGGUCGACCCAAGUGGUUGAGCCUACGUCAUAAUUUGUUGUUGCAGAGGGGGCCUGUGUUCGCGCAGCCCCUAC
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).)))).................(((((..(((((....))))).))))).
|
71
|
AUACUUACCUGGACGGGGUCAAUAGGCGAUCAAUAAGACCCAUGGCCUAGGUUGGUGACCUCCAUUGCACUUUGGAGGGGUGCCAAUCUAAGGUCGGCCCAAGUGGUCGAGCCUACGUCAUAAUUUGUUGCUGUGAGGGCCUGUGUUCGCGCGGCCCCUGC
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))).
|
72
|
AUACUUACCUGGACGGGGUCAAUGGGCGAUCAUGAACACCCAUGGCCUAGGUUGGUGACCAUCAUUGCACUUUGAAGGGGUGCCCGCCUAAGGUCGGCCCAAGUGGUCGAGCCUACGUCAUAAUUUGUUGCUGAGGGGGCCUGCGUUCGCGCGGCCCCUGC
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))).
|
73
|
UUACUUACCUGGACGGGGUCAAUUGGCGAUCAUGAAGGUCCAUGGCCUAGGUUGGUAACCUCCAUUGCACUUAGGAGAGGUGCCUACCUAAGAUCGGCCCAAGUGGCCGAAUCUACGUCAUAAUUUGUUGCUGAGGGGGCCUGCGUUCGCGCGGCCCCUGC
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))).
|
74
|
AUACUUACCUGGACGGGGUCUAUGGGCGAUCAUGUAGGUCCAUGGCCUAGGUUGGUGACUUUCAUUGCACUUUGGAGGGGUGCCCGCCUAAGAUCAGCCCAAGAGGUUGAGUCUACAUCAUAAUUUGUUGCUGAGGGGGCAUGCGUUCGCGCAGCCCCUGC
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))).
|
75
|
AUACUUACCUGGAUGGGGUCGAUGGGUGAUCAUGAAGGCCCAUGGCUAGGAUUGUGACCUCCAUUGCACUUAGGAGGGGUGCUUUCCUAAGGUCUACCCAAGUGGUGGAGCCUACAUCAUAAUUUGUUGCCUGAGGGGGCCUGCGUUCGCGCGGCCCCCAC
|
...........((((.(((((.(((((..........))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((..(((((....))))).))))).
|
76
|
AUACUUACCUGGAUGGGGUCAAUGGGUGAUCAAGAAGGCCCAUGGCUAGGCAAGUGACCUCCAUUGCACUUAGGAGGGGUGCUAGCCUAAGGUCUACCCAAGUGGUGGAGCCUACAUCAUAAUUUGUUGCUGUGGGGGCCUGUGUUCGCGCGGCCCCCUC
|
...........((((.(((((.(((((..........))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))).
|
77
|
AUACUUACCUGGAUGGGGUCAAUGGGUGAUCAUGAAGGCCCAUGGCUAGGCAAGUGACUUCCAUUGCACUUAGGAGGGGUGCUUGCCUAAGGUCUACCCAAGUGGUGGAACCUACAUCAUAAUUUGUUGCUGUGGGGGCCUGCGUUCGCGCGGCCCUCUU
|
...........((((.(((((.(((((..........))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))).
|
78
|
AUACUUACCUGGACGGGGUCAAUGGAUGAUCAAUAAGGUCCAUGGCCUAGGGAAGUAACCUCCAUUGCACUUAGGAGGGGUGCUUUCCUAAGGUCUGCCCAAGUGGCAGAGCCUACGUCAUAAUUUGUGGUAGUGGGGGCUUGCGUUCGCGCAGCCCCUUC
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))).
|
79
|
AUACUUACCUGGACGGGGUCAAUGGAUGAUCAAGAAGGUCCAUGGCCUAGGGAAGUAACCUCCAUUGCACUGAGGAGGGGUGCCUUUCUAAGGUCUGUCCAAGUGACAGAGCCUACGUCAUAAUUUGUGGUAGUGGGGGCCUGCGUUCGCGCGGCCCCUUU
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))).
|
80
|
AUACUUACCUGGACGGGGUCAAUGGAUGAUCUAUAAGGUCCAUGGCCUAGGGAAGUGACCUUCAUUGCACUCAGAAGGGGUGCUACUCUAAGGUCUGUCCAAGUGAUGGAGCCUACGUCAUAAUUUGUGGUAGUGGGGGCCUGCGUUCGCGCGGCCCCUUA
|
...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))).
|
81
|
AUCCGAGUGCAAGGGCGUUAUCCAUCUCAAUGAGGCUUUGCCGAGAGUGGAUUUUUGCUAGUUGAAAACUAUACACUGACCGCUCCUACUUGGGUUCGCCUGGGUAGGGAAUUUUUGGAACACUUUUCCUAUGGAAACUUUUCUUUCAUUGCGAUCGGUCCUUUAUGAACUGGCGCGAAGAAGG
|
................((.(((((.(((................))))))))..))....((((............))))...(((((((((((....)))))))))))............((((.......................................................))))
|
82
|
AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUAUUGCUGGUUGAAAUUUAUUUUUAACCAUGACCUCCUCCUCAUAACGUAUUGUGUCUUUCAUUUUACACAUGUGUUAUGCAGGGAAUUUUUGGAACCUACCUUUUUUUCCUUCUUCAAGAAG
|
................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((.....................)))))))))).)))............((((..................))))
|
83
|
AUCCUUAUGCAAGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAAACCAGACCUGCUCCUCAUUGUCGCCAGUUAGAUGUUCGCUUCAUGAACAUCUCAGAUAAUGUAGGGAAUUUUUGGAAUACUUUUAUUUUCUAAUCAUGAAUUUUCCCAUCAAGAUAACCGAUGAGAGAAGGAGU
|
................((.(((((.(((.................))))))))..))....((((...............))))....(((((((((((((...........................)).)))))))).)))............((((................................................))))
|
84
|
AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCGCUUAUCGGUGUUCGCUUUUGAAUACUUCAAGACUAUGUAGGGAAUUUUUGGAAUUUUUUUCUUAUUUAUCGAUAUUUAAACUUUCAAAA
|
................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((...........................)))))))))).)))............((((...........................))))
|
85
|
AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCUACUAUGGGUGUUCGCUUUUGAACACUUCAAGACUAUGUAGGGAAUUUUUGGAAUAUUUUCUCAUAU
|
................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((...........................)))))))))).)))............((((....))))
|
86
|
AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCGUUUAUCGGUGUUCGCUUUUGAAUACUUCAAGACUAUGUAGGGAAUUUUUGGAAUAUUUCUUUUA
|
................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((...........................)))))))))).)))..............((....))
|
87
|
AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCAAUUCGGUGUUCGCUUUUGAAUACUUCAAGACUAUGUAGGGAAUUUUUGGAAUACCUUUUUUCAUUACCGAUAUUCAUUCUUUCAAAGGGACUGUUUAUUUUUCUUUGGAAGUAAUAUCAAAAAAUAGGU
|
................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((.........................)))))))))).)))............((((.....................................................................))))
|
88
|
AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCAAUUCGGUGUUCGCUUUUGAAUACUUCAAGACUAUGUAGGGAAUUUUUGGAAUACCUUUUUUCAUUACCGAUAUUCAUUCUUUCAAAGGGACUGUUUAUUUUUCUUUGGAAGUAAUAUCAAAAAAUAGGU
|
................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((.........................)))))))))).)))............((((.....................................................................))))
|
89
|
AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCAAUUCUGUGUUCGCUUUUGAACACUUCAGGACUAUGUAGGGAAUUUUUGGAAUACUUUUUUUUCGUUUACCGAUAUUCAUUCUUUCAAAGAAACUUUUCAUCUUUCUUUGGAAGU
|
................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((.........................)))))))))).)))............((((......................................................))))
|
90
|
AGCUUAGCGCAGUGGCAAUACCGUAACCAAUGAAGCCUCCCUGAGGUGCGGUUAUUGCUAGUUGAAAACUUUAACCAACCCACGCCAUGGGACGUGAAAUACCGUCCACUACGGCAAUUUUUGGAAGCCCUUACGAGGG
|
................((.(((((.(((................))))))))..))....((((...........))))....(((((((((((((...)).))))))))..)))............((((....))))
|
91
|
AUCUCUGCGCAGUGGCGAUAUCGUAACCAAUGAGGUUCUACCGAGGUGCGAUUAUUGCUAGUUGAAAACUUUUACCAAUACCCCGCCAAGACGAUGUGAAAUACCAUCGGCUACGGCAAUUUUUGACAGCCCUUACGAGGG
|
................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....))))
|
92
|
AGCUUUGCGCAGUGGCGAUAUCGUAACCAAUGAAGGUUUACUGAGGUGCGAUUAUUGCUAGUUGAAAACUUAUACCAAUACCCCGCCUAGGAAAUGUGUAAUACCAUUUCCUAUGGCAAUUUUUGAAAGCUUCUAAGGAAG
|
................((.(((((.(((................))))))))..))....((((...........)))).....(((((((((((((......)))))))))).)))............((((....))))
|
93
|
AGCUUUGCGCAGUGGCAGUAUCGUAGCCGAUGAGGUCUAACCGAGGCGCGAUUAUUGCUUAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUGCGGAGA
|
................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....))))
|
94
|
AGCUUUGCGCAGUGGCAAUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACGGUCUCUACGGAGA
|
................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....))))
|
95
|
AGCUUUGCGCAGUGGCAAUAUCGUAGCCAGUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUACGGAGA
|
................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....))))
|
96
|
AGCUUUGCGCAGUGGCAGUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUACGGAGA
|
................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....))))
|
97
|
AGCUUUGCGCAGUGGCAGUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUUCGGAGA
|
................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....))))
|
98
|
AGCUUUGCGCAGUGGCAGUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACGGUCUCUACGGAGA
|
................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....))))
|
99
|
AGCUUUGCGCAGUGGCAGUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGCAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUACGGAGA
|
................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((....))))))))))..)))............((((....))))
|
End of preview. Expand
in Data Studio
RIVAS
The RIVAS dataset is a curated collection of RNA sequences and their secondary structures, designed for training and evaluating RNA secondary structure prediction methods. The dataset combines sequences from published studies and databases like Rfam, covering diverse RNA families such as tRNA, SRP RNA, and ribozymes. The secondary structure data is obtained from experimentally verified structures and consensus structures from Rfam alignments, ensuring high-quality annotations for model training and evaluation.
Disclaimer
This is an UNOFFICIAL release of the RIVAS dataset by Elena Rivas, et al.
The team releasing RIVAS did not write this dataset card for this dataset so this dataset card has been written by the MultiMolecule team.
Example Entry
| id | sequence | secondary_structure |
|---|---|---|
| AACY020454584.1_604-676 | ACUGGUUGCGGCCAGUAUAAAUAGUCUUUAAG... | ((((........)))).........((........ |
Column Description
The converted dataset consists of the following columns, each providing specific information about the RNA secondary structures, consistent with the bpRNA standard:
id: A unique identifier for each RNA entry. This ID is derived from the original
.stafile name and serves as a reference to the specific RNA structure within the dataset.sequence: The nucleotide sequence of the RNA molecule, represented using the standard RNA bases:
- A: Adenine
- C: Cytosine
- G: Guanine
- U: Uracil
secondary_structure: The secondary structure of the RNA represented in dot-bracket notation, using up to three types of symbols to indicate base pairing and unpaired regions, as per bpRNA's standard:
- Dots (
.): Represent unpaired nucleotides. - Parentheses (
(and)): Represent base pairs in standard stems (page 1). - Square Brackets (
[and]): Represent base pairs in pseudoknots (page 2). - Curly Braces (
{and}): Represent base pairs in additional pseudoknots (page 3).
- Dots (
Variations
This dataset is available in three variants:
- RIVAS: Includes TrainSetA (3166 sequences) for training, TestSetA (697 sequences) for validation and TestSetB (430 sequences) for testing.
- RIVAS-A: Includes TrainSetA (3166 sequences) and TestSetA (697 sequences), emphasizing sequence diversity while minimizing overlap between training and test sets. Suitable for evaluating RNA secondary structure prediction models on diverse RNA families.
- RIVAS-B: Consists of TrainSetB (1094 sequences) and TestSetB (430 sequences) derived from Rfam alignments, offering additional structural diversity and RNA types not present in RIVAS-A. Designed for testing the generalization capability of models trained on different types of RNA structures.
Related Datasets
- bpRNA-spot: A subset of RIVAS that applies CD-HIT (CD-HIT-EST) to remove sequences with more than 80% sequence similarity from RIVAS.
- RNAStrAlign: A database of RNA secondary with the same families as ArchiveII, usually used for training.
License
This dataset is licensed under the AGPL-3.0 License.
SPDX-License-Identifier: AGPL-3.0-or-later
Citation
@article{rivas2012a,
author = {Rivas, Elena and Lang, Raymond and Eddy, Sean R},
journal = {RNA},
month = feb,
number = 2,
pages = {193--212},
publisher = {Cold Spring Harbor Laboratory},
title = {A range of complex probabilistic models for {RNA} secondary structure prediction that includes the nearest-neighbor model and more},
volume = 18,
year = 2012
}
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