metadata
dataset_info:
- config_name: cells
features:
- name: name
dtype: string
- name: tissue
dtype: string
- name: top_expressed_genes
dtype: string
- name: top_expressed_pathways
dtype: string
- name: top_pathways_from_num_markers
dtype: string
- name: genetic_dependencies
dtype: string
- name: description
dtype: string
splits:
- name: cells
num_bytes: 254799
num_examples: 102
download_size: 111757
dataset_size: 254799
- config_name: genes
features:
- name: gene
dtype: string
- name: uniprot_id
dtype: string
- name: protein_name
dtype: string
- name: protein_function
dtype: string
- name: protein_domains
list: string
- name: protein_interactions
list: string
- name: pathways
list: string
- name: go_mf
list: string
- name: go_bp
list: string
- name: go_cc
list: string
- name: subcellular_location
dtype: string
- name: is_essential
dtype: bool
splits:
- name: genes
num_bytes: 83304216
num_examples: 19017
download_size: 10579393
dataset_size: 83304216
- config_name: pathways
features:
- name: pathway
dtype: string
- name: genes
list: string
- name: full_description
dtype: string
- name: brief_description
dtype: string
splits:
- name: pathways
num_bytes: 13211887
num_examples: 14743
download_size: 3489604
dataset_size: 13211887
- config_name: reasoning_nadig_replogle_new
features:
- name: gene_target
dtype: string
- name: protein_target
dtype: string
- name: cell_type
dtype: string
- name: tissue_type
dtype: string
- name: pathway_name
dtype: string
- name: pathway_change
dtype: string
- name: pathway_score
dtype: float64
- name: experiment
dtype: string
- name: cell_file
dtype: string
- name: is_essential
dtype: bool
splits:
- name: train
num_bytes: 480630757
num_examples: 1902445
- name: test
num_bytes: 173775072
num_examples: 696756
download_size: 28354922
dataset_size: 654405829
- config_name: reasoning_papalexi2021
features:
- name: gene_target
dtype: string
- name: protein_target
dtype: string
- name: cell_type
dtype: string
- name: tissue_type
dtype: string
- name: pathway_name
dtype: string
- name: pathway_change
dtype: string
- name: pathway_score
dtype: float64
- name: experiment
dtype: string
- name: cell_file
dtype: string
- name: is_essential
dtype: bool
splits:
- name: train
num_bytes: 35102751
num_examples: 132716
download_size: 1978822
dataset_size: 35102751
configs:
- config_name: cells
data_files:
- split: cells
path: cells/cells-*
- config_name: genes
data_files:
- split: genes
path: genes/genes-*
- config_name: pathways
data_files:
- split: pathways
path: pathways/pathways-*
- config_name: reasoning_nadig_replogle_new
data_files:
- split: train
path: reasoning_nadig_replogle_new/train-*
- split: test
path: reasoning_nadig_replogle_new/test-*
- config_name: reasoning_papalexi2021
data_files:
- split: train
path: reasoning_papalexi2021/train-*